RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 PHTF1Q9UMS5 762 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MRPL11Q9Y3B7 192 aaKnown RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 IPPQ9Y573 584 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MORC2Q9Y6X9 1032 aaPredicted RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 ZNF197O14709 1029 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 FIBPO43427 364 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 FSBPO95073 299 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SLC3A2P08195 630 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 MYBL2P10244 700 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 JUPP14923 745 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 FCARP24071 287 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 KIR2DL3P43628 341 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 TFAP4Q01664 338 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SP4Q02446 784 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 KRT72Q14CN4 511 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SART3Q15020 963 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 FAM78AQ5JUQ0 283 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 GPR158Q5T848 1215 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 LYSMD4Q5XG99 296 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SYT13Q7L8C5 426 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SRRM1Q8IYB3 904 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 AMER2Q8N7J2 671 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 ACRBPQ8NEB7 543 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SEPT1Q8WYJ6 367 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 TBC1D5Q92609 795 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SMARCD2Q92925 531 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 EXOC4Q96A65 974 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 MPP4Q96JB8 637 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 HIST1H2AHQ96KK5 128 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 HIST1H2AJQ99878 128 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 POFUT1Q9H488 388 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SLITRK6Q9H5Y7 841 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 CPNE5Q9HCH3 593 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 TMEM74BQ9NUR3 256 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 USP36Q9P275 1121 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 DNAJB4Q9UDY4 337 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 DBNLQ9UJU6 430 aaKnown RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 PILRBQ9UKJ0 227 aa5.91□□□□□ -1.46
AP3S1-202ENST00000395548 NIPBLQ6KC79 2804 aaeCLIP5.91□□□□□ -1.46
AP3S1-202ENST00000395548 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 BAZ2AQ9UIF9 1905 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 NRP1O14786 923 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 PRDM1O75626 825 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 GJB3O75712 270 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 PEX11BO96011 259 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 RHOP08100 348 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ATXN1LP0C7T5 689 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 CDK4P11802 303 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 KRT10P13645 584 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 HNRNPLP14866 589 aaKnown RBP eCLIP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 BPIP17213 487 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 TYRP1P17643 537 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 MAKP20794 623 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 MAN2A2P49641 1150 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 OCRLQ01968 901 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 GRM4Q14833 912 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 PGM5Q15124 567 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 PLCB4Q15147 1175 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ELAVL1Q15717 326 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 USP41Q3LFD5 358 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 FBXO43Q4G163 708 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 FKBP15Q5T1M5 1219 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 MTHFD1LQ6UB35 978 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 STOX1Q6ZVD7 989 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ESPNLQ6ZVH7 1005 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 FAM186BQ8IYM0 893 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 NXPE1Q8N323 547 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 TSTD1Q8NFU3 115 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 CCDC26Q8TAB7 109 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 SKA1Q96BD8 255 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ARL8AQ96BM9 186 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 FUBP3Q96I24 572 aaKnown RBP eCLIP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 LRGUKQ96M69 825 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 FZD8Q9H461 694 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 AZI2Q9H6S1 392 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 ZMAT4Q9H898 229 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 THG1LQ9NWX6 298 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 H2AFY2Q9P0M6 372 aaPredicted RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 CEP72Q9P209 647 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 DNMT3BQ9UBC3 853 aaKnown RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 HECAQ9UBI9 543 aaPredicted RBP5.9□□□□□ -1.46
AP3S1-202ENST00000395548 DMTF1Q9Y222 760 aa5.9□□□□□ -1.46
AP3S1-202ENST00000395548 SPG11Q96JI7 2443 aa5.9□□□□□ -1.47
AP3S1-202ENST00000395548 THADAQ6YHU6 1953 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 PMM2O15305 246 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 MTSS1O43312 755 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 MFAP3LO75121 409 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 PRKD3O94806 890 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 GNAI3P08754 354 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 SETSIPP0DME0 302 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 CEBPBP17676 345 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 PTPN2P17706 415 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 BCKDHBP21953 392 aa5.89□□□□□ -1.47
AP3S1-202ENST00000395548 DDIT3P35638 169 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms