RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CDKL2Q92772 493 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NT5C3BQ969T7 300 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 MARK4Q96L34 752 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 HSFY1Q96LI6 401 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 SMOQ99835 787 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 LRRC4Q9HBW1 653 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 TXNDC16Q9P2K2 825 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 LRCH1Q9Y2L9 728 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CASTOR2A6NHX0 329 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 HACD1B0YJ81 288 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 G3V2L1 256 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 TK2O00142 265 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 LIN7AO14910 233 aaPredicted RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 POLBP06746 335 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ELNP15502 786 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 MPSTP25325 297 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 CCND3P30281 292 aaPredicted RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ADRA1BP35368 520 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 GP5P40197 560 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 THPOP40225 353 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 NUMBP49757 651 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SCNN1GP51170 649 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 CACNB2Q08289 660 aaPredicted RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 PDK1Q15118 436 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 PAN2Q504Q3 1202 aaKnown RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 C4orf22Q6V702 233 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 LIMS2Q7Z4I7 341 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SIX6OS1Q8N1H7 587 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ZNF184Q99676 751 aaPredicted RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 COG4Q9H9E3 785 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 IARS2Q9NSE4 1012 aaKnown RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 A0A096LPK6 155 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 CIB2O75838 187 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 JUNP05412 331 aaKnown RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ASGR1P07306 291 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ITGAXP20702 1163 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 LRPAP1P30533 357 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 NOS2P35228 1153 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SNX16P57768 344 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 CUL3Q13618 768 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 BNIPLQ7Z465 357 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 KDELC2Q7Z4H8 507 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 DEFB107AQ8IZN7 70 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SENP8Q96LD8 212 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ANKRD27Q96NW4 1050 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 RBBP8Q99708 897 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 SPC25Q9HBM1 224 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ZNF212Q9UDV6 495 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 ADAMTS6Q9UKP5 1117 aa13.76□□□□□ -0.21
GTF2F1-201ENST00000394456 BUD23O43709 281 aaKnown RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 NCAM1P13591 858 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 WARSP23381 471 aaKnown RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 CD52P31358 61 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 ACADSBP45954 432 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 ATXN3P54252 364 aaPredicted RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 GRIK3Q13003 919 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 PAFAH1B3Q15102 231 aaKnown RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 SERINC5Q86VE9 423 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 TOP6BLQ8N6T0 577 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC26A7Q8TE54 656 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 EBF3Q9H4W6 596 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 DDX43Q9NXZ2 648 aaKnown RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 ARL5CA6NH57 179 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 SEPT4O43236 478 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 JCHAINP01591 159 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 C2P06681 752 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 THP07101 528 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 MRPS35P82673 323 aaKnown RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 CDC16Q13042 620 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 KCNA10Q16322 511 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 CMPK2Q5EBM0 449 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 TMEM198Q66K66 360 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 IRGCQ6NXR0 463 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 CYS1Q717R9 158 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 ARHGAP24Q8N264 748 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 RAB3IL1Q8TBN0 382 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC39A10Q9ULF5 831 aa13.75□□□□□ -0.21
GTF2F1-201ENST00000394456 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 KPNA6O60684 536 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SBK3P0C264 359 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SKIP12755 728 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 CNTFP26441 200 aa13.74□□□□□ -0.21
GTF2F1-201ENST00000394456 SERPINB5P36952 375 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms