RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 IGSF1Q8N6C5 1336 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 PIPSLA2A3N6 862 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 MBD3L4A6NDZ8 208 aaPredicted RBP3.65□□□□□ -1.82
XRN1-202ENST00000392981 MBD3L3A6NE82 208 aaPredicted RBP3.65□□□□□ -1.82
XRN1-202ENST00000392981 DYNC1LI2O43237 492 aaPredicted RBP3.65□□□□□ -1.82
XRN1-202ENST00000392981 UROSP10746 265 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 ITIH1P19827 911 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 SFNP31947 248 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 MTIF2P46199 727 aaKnown RBP3.65□□□□□ -1.82
XRN1-202ENST00000392981 EFNB1P98172 346 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 SGCGQ13326 291 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 IQCB1Q15051 598 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 KRT31Q15323 416 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 ERCC6LQ2NKX8 1250 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 CFAP157Q5JU67 520 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 GPAT2Q6NUI2 795 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 TRIM72Q6ZMU5 477 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 RABEPKQ7Z6M1 372 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 ZNF606Q8WXB4 792 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 TEKT1Q969V4 418 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 DGAT2Q96PD7 388 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 NUDCD1Q96RS6 583 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 ATAD3AQ9NVI7 634 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 SLC45A2Q9UMX9 530 aa3.65□□□□□ -1.82
XRN1-202ENST00000392981 AAR2Q9Y312 384 aaKnown RBP3.65□□□□□ -1.82
XRN1-202ENST00000392981 CDHR4A6H8M9 788 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 MAGEB3O15480 346 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SDHBP21912 280 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PCGF2P35227 344 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 HSD17B4P51659 736 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SRSF11Q05519 484 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 PPP3CAQ08209 521 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 KCNC3Q14003 757 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PUM1Q14671 1186 aaKnown RBP eCLIP3.65□□□□□ -1.83
XRN1-202ENST00000392981 MYLK3Q32MK0 819 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ARL13AQ5H913 290 aaPredicted RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 KCNT1Q5JUK3 1230 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RTP2Q5QGT7 225 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PLEKHS1Q5SXH7 462 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TANGO2Q6ICL3 276 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 MOXD1Q6UVY6 613 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SV2AQ7L0J3 742 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PLEKHH3Q7Z736 793 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CDH26Q8IXH8 852 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC15A3Q8IY34 581 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TCAIMQ8N3R3 496 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TDRD5Q8NAT2 981 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC13A3Q8WWT9 602 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CLEC4DQ8WXI8 215 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SEPT1Q8WYJ6 367 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC9A6Q92581 669 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PTP4A1Q93096 173 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CCT7Q99832 543 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TMEM117Q9H0C3 514 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SERHL2Q9H4I8 314 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RC3H2Q9HBD1 1191 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 NRIP3Q9NQ35 241 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TMOD3Q9NYL9 352 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TAS2R3Q9NYW6 316 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RBPJLQ9UBG7 517 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 FBXL17Q9UF56 701 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 NAALAD2Q9Y3Q0 740 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ERICH2A1L162 156 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 BCAT2O15382 392 aaPredicted RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 SLC25A12O75746 678 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ALDH1A2O94788 518 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 PTBP3O95758 552 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 IL1R1P14778 569 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 MST1P26927 711 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ALDH4A1P30038 563 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ARHGAP8P85298 464 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CYP4F8P98187 520 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 GCNT1Q02742 428 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 GRSF1Q12849 480 aaKnown RBP eCLIP3.65□□□□□ -1.83
XRN1-202ENST00000392981 GAS6Q14393 721 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 GSTA3Q16772 222 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 TMEM196Q5HYL7 178 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CRB2Q5IJ48 1285 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 GRAMD4Q6IC98 578 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 KLC3Q6P597 504 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 NCEH1Q6PIU2 408 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 WDR88Q6ZMY6 472 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RBM43Q6ZSC3 357 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 CAND1Q86VP6 1230 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 SUN5Q8TC36 379 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 KAT2AQ92830 837 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SIN3AQ96ST3 1273 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 ZNF416Q9BWM5 594 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 RNPEPQ9H4A4 650 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 COQ10BQ9H8M1 238 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 C5AR2Q9P296 337 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 CLEC4AQ9UMR7 237 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 SPACA6W5XKT8 324 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 E9PBE3 544 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 EBAG9O00559 213 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 FAM155BO75949 473 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 WISP1O95388 367 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 LARGE1O95461 756 aa3.65□□□□□ -1.83
XRN1-202ENST00000392981 C4BPAP04003 597 aaKnown RBP3.65□□□□□ -1.83
XRN1-202ENST00000392981 GALTP07902 379 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms