RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LRTOMTQ8WZ04 291 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 NPIPB3Q92617 1050 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 USP13Q92995 863 aaPredicted RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 RUNDC1Q96C34 613 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 APIPQ96GX9 242 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF333Q96JL9 665 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 FEM1CQ96JP0 617 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 AIFM3Q96NN9 605 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 STRBPQ96SI9 672 aaKnown RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 TUBA1CQ9BQE3 449 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 PYGO2Q9BRQ0 406 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 RHOBTB2Q9BYZ6 727 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 BARHL1Q9BZE3 327 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM60Q9H2L4 133 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 HIPK3Q9H422 1215 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 KLHL31Q9H511 634 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF696Q9H7X3 374 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 TXNRD2Q9NNW7 524 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 PRDM11Q9NQV5 511 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 HOMER2Q9NSB8 354 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 TYW1Q9NV66 732 aaKnown RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 CDH22Q9UJ99 828 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 AGO1Q9UL18 857 aaKnown RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 RAB21Q9UL25 225 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 PNMA8BQ9ULN7 279 aaPredicted RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 ZMYND8Q9ULU4 1186 aaPredicted RBP0.61□□□□□ -2.31
SNORD28-201ENST00000384706 PHTF1Q9UMS5 762 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 SLC12A4Q9UP95 1085 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 TCF19Q9Y242 345 aa0.61□□□□□ -2.31
SNORD28-201ENST00000384706 GREB1LQ9C091 1923 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 IGHV4OR15-8A0A075B7B6 117 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 A0A087WZ62 844 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 IGHV4-28A0A0C4DH34 117 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PNMA6EA0A0J9YXQ4 647 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 A0A0U1RQJ8 604 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 A0A1B0GVM2 712 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 DYTNA2CJ06 578 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 DDTLA6NHG4 134 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MCIDASD6RGH6 385 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 NPIPB11E5RHQ5 1161 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM72CH0Y354 149 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 C16orf97H3BN30 126 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 J3KTA2 159 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 M0QYT0 321 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SYT5O00445 386 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 HSPB6O14558 160 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FRS3O43559 492 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 EDIL3O43854 480 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 KIF1CO43896 1103 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MGEA5O60502 916 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TAF5LO75529 589 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ALDH1L1O75891 902 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TMCC1O94876 653 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CH25HO95992 272 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ALDOAP04075 364 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PRSS1P07477 247 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CETPP11597 493 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FGF5P12034 268 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CKMT1AP12532 417 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ENO3P13929 434 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PECAM1P16284 738 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 GNLYP22749 145 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MST1P26927 711 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TYK2P29597 1187 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SSTR2P30874 369 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SLC5A2P31639 672 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 GRK5P34947 590 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 RPL3P39023 403 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PIK3CBP42338 1070 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 RAB27AP51159 221 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CYP2J2P51589 502 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 NR0B1P51843 470 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ADPRHP54922 357 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 LINC01547P58512 204 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 IRX6P78412 446 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZBTB16Q05516 673 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SREBF2Q12772 1141 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ATP1A4Q13733 1029 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 DHX34Q14147 1143 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CTTNQ14247 550 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CSHL1Q14406 222 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TTF1Q15361 905 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM30BQ3MIR4 351 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ACCSLQ4AC99 568 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ARHGAP29Q52LW3 1261 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ARHGAP15Q53QZ3 475 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF484Q5JVG2 852 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 EFHC1Q5JVL4 640 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF569Q5MCW4 686 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM72AQ5TYM5 149 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 KLHDC7AQ5VTJ3 777 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM72DQ6L9T8 149 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MSANTD2Q6P1R3 559 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ARHGAP11AQ6P4F7 1023 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM88Q6PEY1 159 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 DARS2Q6PI48 645 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SLC30A9Q6PML9 568 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 C19orf48Q6RUI8 117 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 KIAA0408Q6ZU52 694 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FOXL2NBQ6ZUU3 175 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 268 ms