RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 RPL22P35268 128 aaKnown RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 VPS41P49754 854 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 CLCN6P51797 869 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 GPS1Q13098 491 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 CUL1Q13616 776 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 FSCBQ5H9T9 825 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 WDR93Q6P2C0 686 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PARM1Q6UWI2 310 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ARHGEF18Q6ZSZ5 1173 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 GLIS1Q8NBF1 620 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 OR7D4Q8NG98 312 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 SNF8Q96H20 258 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 SPATA13Q96N96 652 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 HINFPQ9BQA5 517 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 FEM1AQ9BSK4 669 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ACE2Q9BYF1 805 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PARD6BQ9BYG5 372 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 SLC2A11Q9BYW1 496 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 DPH5Q9H2P9 285 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 SNX24Q9Y343 169 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ZSCAN5CA6NGD5 496 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 BHMG1C9JSJ3 638 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 KDELR3O43731 214 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PRAMEF11O60813 436 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 NEBLO76041 1014 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 CYP17A1P05093 508 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ADH5P11766 374 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PTPN3P26045 913 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 RENBPP51606 427 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 IFI35P80217 286 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 WASHC5Q12768 1159 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 NR1H3Q13133 447 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 CALCOCO2Q13137 446 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 HNRNPDQ14103 355 aaKnown RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 TEX44Q53QW1 395 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ANKRD20A2Q5SQ80 823 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ANKRD20A1Q5TYW2 823 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ANKRD20A3Q5VUR7 823 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 TRIM68Q6AZZ1 485 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PRUNE1Q86TP1 453 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 OR52K2Q8NGK3 314 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 CCDC110Q8TBZ0 833 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ZNF599Q96NL3 588 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 XPO6Q96QU8 1125 aaKnown RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 PNKPQ96T60 521 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 KXD1Q9BQD3 176 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 WHRNQ9P202 907 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 KLHL8Q9P2G9 620 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-203ENST00000380996 VPS28Q9UK41 221 aa20.88■□□□□ 0.93
TSSC4-203ENST00000380996 ESYT3A0FGR9 886 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 HOXC11O43248 304 aaPredicted RBP20.87■□□□□ 0.93
TSSC4-203ENST00000380996 JCHAINP01591 159 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 ITIH2P19823 946 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 CSKP41240 450 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 PID1Q7Z2X4 250 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 PCGF5Q86SE9 256 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 CPA6Q8N4T0 437 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 EIF1ADQ8N9N8 165 aaKnown RBP20.87■□□□□ 0.93
TSSC4-203ENST00000380996 WFDC5Q8TCV5 224 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 IFT81Q8WYA0 676 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 MAML1Q92585 1016 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 FGF14Q92915 247 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 ASIC4Q96FT7 647 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 ZFYVE19Q96K21 471 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 C2orf49Q9BVC5 232 aaPredicted RBP20.87■□□□□ 0.93
TSSC4-203ENST00000380996 TRMT61BQ9BVS5 477 aaKnown RBP20.87■□□□□ 0.93
TSSC4-203ENST00000380996 FAM129AQ9BZQ8 928 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 EBF3Q9H4W6 596 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 HAUS2Q9NVX0 235 aa20.87■□□□□ 0.93
TSSC4-203ENST00000380996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-203ENST00000380996 J3KR12 359 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 CHADO15335 359 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 MZF1P28698 734 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-203ENST00000380996 TNFRSF8P28908 595 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 RPL21P46778 160 aaKnown RBP20.86■□□□□ 0.93
TSSC4-203ENST00000380996 LMAN2Q12907 356 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 MARC1Q5VT66 337 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 ITPRIPL1Q6GPH6 555 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 ZNF567Q8N184 647 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 PLCD3Q8N3E9 789 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 ST13P5Q8NFI4 369 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-203ENST00000380996 CASKIN2Q8WXE0 1202 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 PLA2G2FQ9BZM2 168 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 ECT2Q9H8V3 914 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 RAB21Q9UL25 225 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 OR51B4Q9Y5P0 310 aa20.86■□□□□ 0.93
TSSC4-203ENST00000380996 ANHXE9PGG2 379 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 CBX4O00257 560 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 CACNG3O60359 315 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 SEC31AO94979 1220 aaKnown RBP20.85■□□□□ 0.93
TSSC4-203ENST00000380996 ARSAP15289 507 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 IVDP26440 423 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 PLK1P53350 603 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 NRLP54845 237 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 HTR4Q13639 388 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 GRM2Q14416 872 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 RFTN1Q14699 578 aaPredicted RBP20.85■□□□□ 0.93
TSSC4-203ENST00000380996 KCTD19Q17RG1 926 aaPredicted RBP20.85■□□□□ 0.93
TSSC4-203ENST00000380996 LEXMQ3ZCV2 418 aa20.85■□□□□ 0.93
TSSC4-203ENST00000380996 TMCO4Q5TGY1 634 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms