RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SMTNL2Q2TAL5 461 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 CAND1Q86VP6 1230 aaKnown RBP7.93□□□□□ -1.14
CDKL5-202ENST00000379996 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 NUP93Q8N1F7 819 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 FAM13CQ8NE31 585 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 PDZD8Q8NEN9 1154 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 RFWD2Q8NHY2 731 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 FBF1Q8TES7 1133 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 HAUS1Q96CS2 278 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 LPIN3Q9BQK8 851 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 MED10Q9BTT4 135 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 NKX2-4Q9H2Z4 354 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 POPDC2Q9HBU9 364 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
CDKL5-202ENST00000379996 NKIRAS1Q9NYS0 192 aa7.93□□□□□ -1.14
CDKL5-202ENST00000379996 LRRD1A4D1F6 860 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 E5RJQ4 531 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CLDN5O00501 218 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ADAM12O43184 909 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CST8O60676 142 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 LPXNO60711 386 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CLASP2O75122 1294 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 IGLV3-25P01717 112 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KRT7P08729 469 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 MYOGP15173 224 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KRT4P19013 534 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 BDNFP23560 247 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 OR1D2P34982 312 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 MTA1Q13330 715 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 DUSP6Q16828 381 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KCNT1Q5JUK3 1230 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 HP1BP3Q5SSJ5 553 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 MSANTD2Q6P1R3 559 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KLHDC10Q6PID8 442 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 LVRNQ6Q4G3 990 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 FAM183BPQ6ZVS7 135 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CLNKQ7Z7G1 428 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ATP11CQ8NB49 1132 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 LEMD2Q8NC56 503 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 UBA3Q8TBC4 463 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 GPR152Q8TDT2 470 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 TIFAQ96CG3 184 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ERP27Q96DN0 273 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 MRPL38Q96DV4 380 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 PRR11Q96HE9 360 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 B3GALT6Q96L58 329 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CDK5RAP1Q96SZ6 601 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CCDC77Q9BR77 488 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 SMYD2Q9NRG4 433 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ZDHHC7Q9NXF8 308 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CLIC5Q9NZA1 410 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 LRRC42Q9Y546 428 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 TCRBV9S1A1TA0A576 114 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CAPN14A8MX76 684 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 GRXCR1A8MXD5 290 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 GRM6O15303 877 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CHADO15335 359 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 TNRC18O15417 2968 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ATP5HO75947 161 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CXCL14O95715 111 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KRT3P12035 628 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CPB1P15086 417 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ATF6P18850 670 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 IBSPP21815 317 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 PBX2P40425 430 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 AIF1P55008 147 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 YWHAZP63104 245 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 FAM47EQ6ZV65 393 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 GSTA5Q7RTV2 222 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 LAPTM4BQ86VI4 370 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 DYDC1Q8WWB3 177 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 SREK1Q8WXA9 508 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 PSMG2Q969U7 264 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 KLHL29Q96CT2 875 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 CRISPLD1Q9H336 500 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 C12orf65Q9H3J6 166 aaKnown RBP7.92□□□□□ -1.14
CDKL5-202ENST00000379996 SAR1AQ9NR31 198 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 TXLNGQ9NUQ3 528 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ZMYM5Q9UJ78 669 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 ANAPC1Q9H1A4 1944 aa7.92□□□□□ -1.14
CDKL5-202ENST00000379996 TGM5O43548 720 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 ADH1BP00325 375 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 TPBGLP0DKB5 382 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 CYP2F1P24903 491 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 PSMA2P25787 234 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 GJC1P36383 396 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 SLC5A3P53794 718 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 E2F5Q15329 346 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 ACBD5Q5T8D3 534 aaPredicted RBP7.91□□□□□ -1.14
CDKL5-202ENST00000379996 ELMSAN1Q6PJG2 1045 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 CDHR3Q6ZTQ4 885 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 PRPF39Q86UA1 669 aaKnown RBP7.91□□□□□ -1.14
CDKL5-202ENST00000379996 PSTKQ8IV42 348 aaKnown RBP7.91□□□□□ -1.14
CDKL5-202ENST00000379996 EMC1Q8N766 993 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 TCP10LQ8TDR4 215 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 NSMCE1Q8WV22 266 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 SMC6Q96SB8 1091 aa7.91□□□□□ -1.14
CDKL5-202ENST00000379996 UXTQ9UBK9 157 aaPredicted RBP7.91□□□□□ -1.14
CDKL5-202ENST00000379996 ZNF180Q9UJW8 692 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms