RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 PRG2P13727 222 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
TRIM13-202ENST00000378182 ZSWIM1Q9BR11 485 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 FOXP3Q9BZS1 431 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 C10orf88Q9H8K7 445 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 CCDC167Q9P0B6 97 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
TRIM13-202ENST00000378182 CD3EAPO15446 510 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 IFNGR2P38484 337 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ABCG1P45844 678 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 PAFAH2Q99487 392 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ACAT2Q9BWD1 397 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 NFASCO94856 1347 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CAMSAP1Q5T5Y3 1602 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 MYL12BO14950 172 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 RPL9P32969 192 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SREBF1P36956 1147 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 FAM98BQ52LJ0 330 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 PEG10Q86TG7 708 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ADCY4Q8NFM4 1077 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 VPS33AQ96AX1 596 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 KCNN2Q9H2S1 579 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ABCC13Q9NSE7 274 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ZNF780BQ9Y6R6 833 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 AVILO75366 819 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 KHDRBS3O75525 346 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SF3B1O75533 1304 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ADH1AP07327 375 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 PAGE2BQ5JRK9 111 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SMYD1Q8NB12 490 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 TMEM79Q9BSE2 394 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ADPRHL2Q9NX46 363 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CLIC5Q9NZA1 410 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 NCKIPSDQ9NZQ3 722 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 PTGES3LE9PB15 166 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 UBDO15205 165 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SEPT4O43236 478 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 PIRTP0C851 137 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CRADDP78560 199 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CASKIN2Q8WXE0 1202 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 COQ7Q99807 217 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 FAM126AQ9BYI3 521 aaPredicted RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ULBP1Q9BZM6 244 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 EQTNQ9NQ60 294 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ELOVL2Q9NXB9 296 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 HOXC12P31275 282 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 LSP1P33241 339 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 FASTKQ14296 549 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 SUZ12Q15022 739 aaKnown RBP14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 ARHGAP28Q9P2N2 729 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
TRIM13-202ENST00000378182 GYPCP04921 128 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ZNF37AP17032 561 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CASP9P55211 416 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 OR56A4Q8NGH8 313 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MLPHQ9BV36 600 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 H3BMM5 538 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CDHR5Q9HBB8 845 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 NEK6Q9HC98 313 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GNPTGQ9UJJ9 305 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CDC42BPAQ5VT25 1732 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 TSPAN8P19075 237 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 PFKFB4Q16877 469 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 TRIM16LQ309B1 348 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MPPE1Q53F39 396 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GRTP1Q5TC63 336 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GMCL1P1Q8NEA9 526 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 DNAJC9Q8WXX5 260 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GINS4Q9BRT9 223 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 HIPK3Q9H422 1215 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MRGBPQ9NV56 204 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 BCLAF3A2AJT9 711 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 LGALS2P05162 132 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ATP13A4Q4VNC1 1196 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ZFP14Q9HCL3 533 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MED14O60244 1454 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GABRR2P28476 465 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MAD2L1Q13257 205 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MAPK11Q15759 364 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 IQSEC1Q6DN90 963 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ISLR2Q6UXK2 745 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ZNF248Q8NDW4 579 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CD99L2Q8TCZ2 262 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 TRNT1Q96Q11 434 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MTA3Q9BTC8 594 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 ATP13A3Q9H7F0 1226 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms