RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
SF1-203ENST00000377387 FYNP06241 537 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 ATP5BP06576 529 aaKnown RBP18.48■□□□□ 0.55
SF1-203ENST00000377387 ETS2P15036 469 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 NAGLUP54802 743 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 PKNOX1P55347 436 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 CCNA1P78396 465 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 SMYD5Q6GMV2 418 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 PGM2L1Q6PCE3 622 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 EPGNQ6UW88 154 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 SNX32Q86XE0 403 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 FBXW8Q8N3Y1 598 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 VPS39Q96JC1 886 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 GCNAQ96QF7 691 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 RHOBTB2Q9BYZ6 727 aa18.48■□□□□ 0.55
SF1-203ENST00000377387 STN1Q9H668 368 aaKnown RBP18.48■□□□□ 0.55
SF1-203ENST00000377387 DDX43Q9NXZ2 648 aaKnown RBP18.48■□□□□ 0.55
SF1-203ENST00000377387 MEIS3P2A8K0S8 358 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 SRGAP2BP0DMP2 458 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 DARSP14868 501 aaKnown RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 MSLNQ13421 630 aaPredicted RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 PAFAH1B3Q15102 231 aaKnown RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 SDCCAG8Q86SQ7 713 aaPredicted RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 PDSS2Q86YH6 399 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 SGF29Q96ES7 293 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 NR1H4Q96RI1 486 aaPredicted RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 OMDQ99983 421 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 KLHL4Q9C0H6 718 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
SF1-203ENST00000377387 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 MED21Q13503 144 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 GSTA3Q16772 222 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 MMEL1Q495T6 779 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 FSCBQ5H9T9 825 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 AAGABQ6PD74 315 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 SPATA22Q8NHS9 363 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 CATSPER2Q96P56 530 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 TRIM4Q9C037 500 aa18.47■□□□□ 0.55
SF1-203ENST00000377387 PIGNO95427 931 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 TCN1P20061 433 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 USP10Q14694 798 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 DBN1Q16643 649 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 KCTD4Q8WVF5 259 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 RNF34Q969K3 372 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 HNRNPABQ99729 332 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 ACE2Q9BYF1 805 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 SIK2Q9H0K1 926 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 PDP2Q9P2J9 529 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 TLK1Q9UKI8 766 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 RUVBL2Q9Y230 463 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 CAPN8A6NHC0 703 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 JUNP05412 331 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 ENO3P13929 434 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 GRIA4P48058 902 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 CTBP1Q13363 440 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 PDCD2Q16342 344 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 SV2CQ496J9 727 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 TMEM135Q86UB9 458 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 CCNYL1Q8N7R7 359 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 PNPLA1Q8N8W4 532 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 CDRT15Q96T59 188 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 ILKAPQ9H0C8 392 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 AP1G2O75843 785 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 SCNN1AP37088 669 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 RPL34P49207 117 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 AFF1P51825 1210 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 NAB1Q13506 487 aa18.46■□□□□ 0.55
SF1-203ENST00000377387 LSM12Q3MHD2 195 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 ARL13AQ5H913 290 aaPredicted RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 TWF2Q6IBS0 349 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 RWDD4Q6NW29 188 aaKnown RBP18.46■□□□□ 0.55
SF1-203ENST00000377387 MYBPHLA2RUH7 354 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 STX16-NPEPL1H3BU86 382 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 TREHO43280 583 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 SF3B1O75533 1304 aaKnown RBP eCLIP18.45■□□□□ 0.548e-7■■■■□ 24.9
SF1-203ENST00000377387 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.542e-9■■□□□ 14
SF1-203ENST00000377387 POU6F1Q14863 301 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 SLC41A1Q8IVJ1 513 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 KATNBL1Q9H079 304 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 ATXN3LQ9H3M9 355 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 GDAP2Q9NXN4 497 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 DNAJB4Q9UDY4 337 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 ZDHHC2Q9UIJ5 367 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 MT-CYBP00156 380 aaPredicted RBP18.45■□□□□ 0.54
SF1-203ENST00000377387 FAM200BP0CF97 657 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 VCLP18206 1134 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 CYP2B6P20813 491 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 PIK3R1P27986 724 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 MRPS22P82650 360 aaKnown RBP18.45■□□□□ 0.54
SF1-203ENST00000377387 FAM219BQ5XKK7 198 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 DENND6AQ8IWF6 608 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 SREK1Q8WXA9 508 aaKnown RBP18.45■□□□□ 0.54
SF1-203ENST00000377387 FAM96AQ9H5X1 160 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 WDR6Q9NNW5 1121 aaKnown RBP18.45■□□□□ 0.54
SF1-203ENST00000377387 INPP5FQ9Y2H2 1132 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 IPPQ9Y573 584 aa18.45■□□□□ 0.54
SF1-203ENST00000377387 TRIP12Q14669 1992 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms