RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TRBV23OR9-2A0A075B6M9 112 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 A0A1B0GVM2 712 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 TCAF2A6NFQ2 919 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 GUCA1CO95843 209 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 SNRPAP09012 282 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 EPCAMP16422 314 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 PCK1P35558 622 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 GRSF1Q12849 480 aaKnown RBP eCLIP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 PLEKHA7Q6IQ23 1121 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 NYAP1Q6ZVC0 841 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 TTC9BQ8N6N2 239 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 ACTRT1Q8TDG2 376 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 BPIFB1Q8TDL5 484 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 ELAC2Q9BQ52 826 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 PCDH9Q9HC56 1237 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 CAP1Q01518 475 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 GNA12Q03113 381 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 MPP3Q13368 585 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 AARS2Q5JTZ9 985 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 MFSD4BQ5TF39 518 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 FAM46CQ5VWP2 391 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 PAPD7Q5XG87 772 aaKnown RBP8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 HDAC7Q8WUI4 952 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 CASKIN2Q8WXE0 1202 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 TMEM159Q96B96 161 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 HAPLN2Q9GZV7 340 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 SIX2Q9NPC8 291 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 GDAP2Q9NXN4 497 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 WWOXQ9NZC7 414 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 ZNHIT2Q9UHR6 403 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 BAG5Q9UL15 447 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 ZNF510Q9Y2H8 683 aa8.62□□□□□ -1.03
CRNKL1-202ENST00000377340 ANKRD36CQ5JPF3 1778 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 HAS3O00219 553 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 IFRD1O00458 451 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 GRM6O15303 877 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 EDIL3O43854 480 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CHRNB2P17787 502 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 VIPR2P41587 438 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 GAD2Q05329 585 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 XRCC4Q13426 336 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 LY6G5CQ5SRR4 150 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 B3GNT9Q6UX72 402 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 C2orf15Q8WU43 125 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 HERVK_113Q902F9 699 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 P2RY11Q96G91 374 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 MAGEB10Q96LZ2 347 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 GPR88Q9GZN0 384 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 ELAC1Q9H777 363 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 OGDHLQ9ULD0 1010 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 SUPT7LO94864 414 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CYP2A6P11509 494 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 LRPAP1P30533 357 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 SERPINH1P50454 418 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 DPYSL3Q14195 570 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CSHL1Q14406 222 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 TRMT10CQ7L0Y3 403 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 MON1BQ7L1V2 547 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CPNE8Q86YQ8 564 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 SYTL1Q8IYJ3 562 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CYB5D2Q8WUJ1 264 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 WRAP53Q9BUR4 548 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 C1QTNF7Q9BXJ2 289 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CAPN10Q9HC96 672 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 GPAMQ9HCL2 828 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 PCDHGC5Q9Y5F6 944 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 STYXL1Q9Y6J8 313 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 NUMA1Q14980 2115 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 A0A0A0MRY4 1105 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 HMGB1P1B2RPK0 211 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 ALDH1A2O94788 518 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 HAPLN1P10915 354 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 TRIP4Q15650 581 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 UBXN11Q5T124 520 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 SPATA13Q96N96 652 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 VAT1Q99536 393 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 TBL1YQ9BQ87 522 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 ZNF670Q9BS34 389 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 BCO2Q9BYV7 579 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 PSMC3IPQ9P2W1 217 aaPredicted RBP8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 LNPEPQ9UIQ6 1025 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 VPS9D1Q9Y2B5 631 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
CRNKL1-202ENST00000377340 CASP8AP2Q9UKL3 1982 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 TGM5O43548 720 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 SH3BGRLO75368 114 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 BEST1O76090 585 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 FSBPO95073 299 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 ANP32DO95626 131 aa8.6□□□□□ -1.03
CRNKL1-202ENST00000377340 ELFN1P0C7U0 828 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms