RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 EFHD1Q9BUP0 239 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM96AQ9H5X1 160 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ADAMTS6Q9UKP5 1117 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 AP4B1Q9Y6B7 739 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MAGEC1O60732 1142 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 DNAJA2O60884 412 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TARBP2Q15633 366 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LSM12Q3MHD2 195 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 POTEAQ6S8J7 498 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ANKRD52Q8NB46 1076 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CNDP1Q96KN2 507 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ANKRD27Q96NW4 1050 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 POMKQ9H5K3 350 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GPAMQ9HCL2 828 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MPP6Q9NZW5 540 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARHGEF37A1IGU5 675 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ZNF839A8K0R7 811 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TSPAN1O60635 241 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 USP2O75604 605 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PTPN7P35236 360 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 RPL14P50914 215 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 THOP1P52888 689 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CLDN10P78369 228 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 DYNC1I2Q13409 638 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ZNF484Q5JVG2 852 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 DSELQ8IZU8 1212 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 B3GALNT2Q8NCR0 500 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ERLEC1Q96DZ1 483 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NT5MQ9NPB1 228 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 KCNU1A8MYU2 1149 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARSAP15289 507 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TFEBP19484 476 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ME2P23368 584 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ESRRGP62508 458 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLC27A1Q6PCB7 646 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARCQ7LC44 396 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PSTKQ8IV42 348 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PPHLN1Q8NEY8 458 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SKA2Q8WVK7 121 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CIB1Q99828 191 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CPNE1Q99829 537 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TRIM8Q9BZR9 551 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LIN28AQ9H9Z2 209 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SSU72Q9NP77 194 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM8A1Q9UBU6 413 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LZTS1Q9Y250 596 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 YJEFN3A6XGL0 299 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM72CH0Y354 149 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TIMM44O43615 452 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PSMC3P17980 439 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 IL4RP24394 825 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ACADSBP45954 432 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NR2C2P49116 596 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PCLAFQ15004 111 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TBCCQ15814 346 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CNPY1Q3B7I2 92 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM72AQ5TYM5 149 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NAPEPLDQ6IQ20 393 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM72DQ6L9T8 149 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM72BQ86X60 149 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARHGAP18Q8N392 663 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 DCUN1D1Q96GG9 259 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 B3GALT6Q96L58 329 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SEPHS2Q99611 448 aa14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ABI2Q9NYB9 513 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 WARS2Q9UGM6 360 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LAMB2P55268 1798 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GMNNO75496 209 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 DDHD2O94830 711 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLC25A27O95847 323 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MATKP42679 507 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLC18A1P54219 525 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GRTP1Q5TC63 336 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CLEC6AQ6EIG7 209 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PQLC1Q8N2U9 271 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FBXW8Q8N3Y1 598 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TTC39CQ8N584 583 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 OR52K2Q8NGK3 314 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MAPK15Q8TD08 544 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GPR152Q8TDT2 470 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TUBGCP3Q96CW5 907 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCDC90BQ9GZT6 254 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CDH19Q9H159 772 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SIRPGQ9P1W8 387 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SFMBT1Q9UHJ3 866 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PRG3Q9Y2Y8 225 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM95CA0A1B0GW59 222 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCDC189A1A4V9 331 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FGF3P11487 239 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 UQCRBP14927 111 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ITGAXP20702 1163 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CHN2P52757 468 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms