RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 VCLP18206 1134 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 MSLNQ13421 630 aaPredicted RBP13.84□□□□□ -0.19
C9orf47-203ENST00000375851 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
C9orf47-203ENST00000375851 ZBTB49Q6ZSB9 765 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 MON1BQ7L1V2 547 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 CENPLQ8N0S6 344 aaPredicted RBP13.84□□□□□ -0.19
C9orf47-203ENST00000375851 LRRC57Q8N9N7 239 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 FAM120BQ96EK7 910 aaKnown RBP13.84□□□□□ -0.19
C9orf47-203ENST00000375851 P2RY11Q96G91 374 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
C9orf47-203ENST00000375851 CATSPERZQ9NTU4 200 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 NDUFAF1Q9Y375 327 aa13.84□□□□□ -0.19
C9orf47-203ENST00000375851 CNTNAP1P78357 1384 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 MEI4A8MW99 385 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 ADRA1BP35368 520 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 RPL14P50914 215 aaKnown RBP13.83□□□□□ -0.19
C9orf47-203ENST00000375851 BST1Q10588 318 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 CNTN1Q12860 1018 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 TRMT11Q7Z4G4 463 aaKnown RBP13.83□□□□□ -0.19
C9orf47-203ENST00000375851 XYLT1Q86Y38 959 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 BBS7Q8IWZ6 715 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 MCOLN3Q8TDD5 553 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 FCRL2Q96LA5 508 aaPredicted RBP13.83□□□□□ -0.19
C9orf47-203ENST00000375851 EXOSC4Q9NPD3 245 aaKnown RBP13.83□□□□□ -0.19
C9orf47-203ENST00000375851 PDP2Q9P2J9 529 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.19
C9orf47-203ENST00000375851 M0R2N6 131 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 MRASO14807 208 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 CSH1P0DML2 217 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 CSH2P0DML3 217 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 PCNAP12004 261 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 SERPINA4P29622 427 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 XRCC4Q13426 336 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 PDK4Q16654 411 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 PANX3Q96QZ0 392 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 HPS4Q9NQG7 708 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 FBXO6Q9NRD1 293 aaPredicted RBP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 IMPAD1Q9NX62 359 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 XYLBO75191 536 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 STAU1O95793 577 aaKnown RBP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 OR56A5P0C7T3 313 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 PSMC3P17980 439 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 CYP2A7P20853 494 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 IL2P60568 153 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 MILR1Q7Z6M3 343 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 FNIP1Q8TF40 1166 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 DPF3Q92784 378 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 SFMBT1Q9UHJ3 866 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 hCG_2014768A0A024R1R8 64 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 FAM237BA0A1B0GVD1 139 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 LRRC8DQ7L1W4 858 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 MON1AQ86VX9 555 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 PLD3Q8IV08 490 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 MICU2Q8IYU8 434 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 SYT17Q9BSW7 474 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
C9orf47-203ENST00000375851 BCAS3Q9H6U6 928 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 ALG9Q9H6U8 611 aa13.83□□□□□ -0.2
C9orf47-203ENST00000375851 A0A087X1B8 175 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 TSPAN1O60635 241 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 PROCP04070 461 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 GRK3P35626 688 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 CLK1P49759 484 aaKnown RBP13.82□□□□□ -0.2
C9orf47-203ENST00000375851 MAXP61244 160 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
C9orf47-203ENST00000375851 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 CXorf56Q9H5V9 222 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 LMO7Q8WWI1 1683 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 NT5C1B-RDH14C9J2C7 533 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 M0R3G1 203 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 TLR5O60602 858 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 PDE5AO76074 875 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 ZNF682O95780 498 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 LTA4HP09960 611 aaKnown RBP13.82□□□□□ -0.2
C9orf47-203ENST00000375851 ATP6V1B2P21281 511 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 CCDC85BQ15834 202 aaPredicted RBP13.82□□□□□ -0.2
C9orf47-203ENST00000375851 SNX30Q5VWJ9 437 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 PPP4R4Q6NUP7 873 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 DENND1CQ8IV53 801 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 FAM126BQ8IXS8 530 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 DAW1Q8N136 415 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 ACMSDQ8TDX5 336 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 CDRT15Q96T59 188 aa13.82□□□□□ -0.2
C9orf47-203ENST00000375851 MLPHQ9BV36 600 aaPredicted RBP13.82□□□□□ -0.2
C9orf47-203ENST00000375851 TM6SF2Q9BZW4 377 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms