RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PCDHB12Q9Y5F1 795 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 NCANO14594 1321 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 PRDM2Q13029 1718 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 ABCC8Q09428 1581 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 PRAMEF33A0A0G2JMD5 474 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 KDELR3O43731 214 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 PRAMEF10O60809 474 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 CABYRO75952 493 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 HNF1AP20823 631 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 FASP25445 335 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 FAM98BQ52LJ0 330 aaKnown RBP6.05□□□□□ -1.44
SCN2A-202ENST00000375427 SLC36A4Q6YBV0 504 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 DSG4Q86SJ6 1040 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
SCN2A-202ENST00000375427 KDM1BQ8NB78 822 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 CHP1Q99653 195 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 CXXC1Q9P0U4 656 aaPredicted RBP6.05□□□□□ -1.44
SCN2A-202ENST00000375427 M0QX08 132 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 SGCEO43556 437 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 PTBP3O95758 552 aaKnown RBP6.05□□□□□ -1.44
SCN2A-202ENST00000375427 CCNE2O96020 404 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 IFNA1P01562 189 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 HLA-DQA2P01906 255 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 POU2F2P09086 479 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 GGCXP38435 758 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 CALCRLQ16602 461 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 NGLY1Q96IV0 654 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 AK8Q96MA6 479 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 HSPA12BQ96MM6 686 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 SCGB3A2Q96PL1 93 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 DDX50Q9BQ39 737 aaKnown RBP6.05□□□□□ -1.44
SCN2A-202ENST00000375427 DMRT2Q9Y5R5 561 aa6.05□□□□□ -1.44
SCN2A-202ENST00000375427 ACSL1P33121 698 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 IDH3GP51553 393 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ATP2C1P98194 919 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 C2orf54Q08AI8 447 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TAZQ16635 292 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TMEM41BQ5BJD5 291 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SLC35F3Q8IY50 421 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 LCORLQ8N3X6 602 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZHX1-C8orf76Q96EF9 292 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PRMT1Q99873 361 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 C9orf16Q9BUW7 83 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FN3KRPQ9HA64 309 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TAB2Q9NYJ8 693 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MOCS1Q9NZB8 636 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FADS3Q9Y5Q0 445 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 NEDD4P46934 1319 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 NCKAP5LQ9HCH0 1330 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FAM230AA0A1W2PPH8 454 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SEC14L6B5MCN3 397 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 K7EPK0 472 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZPR1O75312 459 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 OR6A2O95222 327 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 NADKO95544 446 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CRABP2P29373 138 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 GRK4P32298 578 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CYP2J2P51589 502 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 DYNLT1P63172 113 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PTH1RQ03431 593 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CHRNDQ07001 517 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 UGCGQ16739 394 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 INO80DQ53TQ3 878 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 XKR3Q5GH77 459 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RNASEH2BQ5TBB1 312 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 KIF2BQ8N4N8 673 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FAM71E2Q8N5Q1 922 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 DDX1Q92499 740 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SEMA4DQ92854 862 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 C12orf43Q96C57 262 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZNF560Q96MR9 790 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 GPATCH2Q9NW75 528 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 KDM2BQ8NHM5 1336 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ANKRD65E5RJM6 399 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SHOXO15266 292 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RNF113AO15541 343 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 UGT2B17O75795 530 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZMYND10O75800 440 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CLPXO76031 633 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HNRNPH1P31943 449 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PPM1AP35813 382 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 DNAJC24Q6P3W2 148 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ARSKQ6UWY0 536 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZFP82Q8N141 532 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 DNAJB14Q8TBM8 379 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CPT1CQ8TCG5 803 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 AURKBQ96GD4 344 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 BTBD2Q9BX70 525 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SLC24A2Q9UI40 661 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 LOC102724200A0A096LPH7 203 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FARS2O95363 451 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CD4P01730 458 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MYL6BP14649 208 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MLLT1Q03111 559 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SLC34A1Q06495 639 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZNF155Q12901 538 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 LARS2Q15031 903 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZNF674Q2M3X9 581 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PAN2Q504Q3 1202 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms