RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ALDH9A1P49189 494 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 SEC24CP53992 1094 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TXNRD1Q16881 649 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 INAVAQ3KP66 663 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 UAP1L1Q3KQV9 507 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 C2orf76Q3KRA6 126 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 SLC39A12Q504Y0 691 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 NCAPH2Q6IBW4 605 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ACAD10Q6JQN1 1059 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 SRGAP1Q7Z6B7 1085 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 GPR65Q8IYL9 337 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 CNOT6LQ96LI5 555 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 SPTLC3Q9NUV7 552 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 DNAJC11Q9NVH1 559 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 UCKL1Q9NWZ5 548 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TRMT112Q9UI30 125 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 RFPL3O75679 317 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TUBG1P23258 451 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 GLRA2P23416 452 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 AFMP43652 599 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 DYNC1I2Q13409 638 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 NPY5RQ15761 445 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 FNDC3BQ53EP0 1204 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 RINT1Q6NUQ1 792 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 GALNT15Q8N3T1 639 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 MINDY1Q8N5J2 469 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ENKURQ8TC29 256 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 CABP5Q9NP86 173 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TUBG2Q9NRH3 451 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 H2AFY2Q9P0M6 372 aaPredicted RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 WHRNQ9P202 907 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 SPASTQ9UBP0 616 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 CCNL1Q9UK58 526 aaPredicted RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 FEM1BQ9UK73 627 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 POLR2AP24928 1970 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 A0A1W2PPW3 197 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ZNF879B4DU55 563 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 K7ERQ8 282 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 AP5Z1O43299 807 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 PFKMP08237 780 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 GSTT2P0CG29 244 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 GSTT2BP0CG30 244 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ADCY7P51828 1080 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 POU4F3Q15319 338 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ZC3H18Q86VM9 953 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 METTL23Q86XA0 190 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 MB21D2Q8IYB1 491 aaPredicted RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 AHI1Q8N157 1196 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 MIER2Q8N344 545 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 LCORLQ8N3X6 602 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 LEMD2Q8NC56 503 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 HIPK4Q8NE63 616 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 C7orf26Q96N11 449 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 RC3H2Q9HBD1 1191 aaKnown RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 PTPRFP10586 1907 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TRBV23-1A0A0A0MS06 115 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 LCHNA4D1U4 455 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 BTBD17A6NE02 478 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 JAK2O60674 1132 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CELA3AP09093 270 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 GNAT1P11488 350 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CHRNA3P32297 505 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 GRK3P35626 688 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 STX17P56962 302 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 SKP1P63208 163 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 HSPA14Q0VDF9 509 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 FOXO1Q12778 655 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ART3Q13508 389 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 DDX39BQ13838 428 aaKnown RBP9.21□□□□□ -0.93
UBR4-201ENST00000375218 ARHGAP19Q14CB8 494 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CNN3Q15417 329 aaKnown RBP9.21□□□□□ -0.93
UBR4-201ENST00000375218 NOTUMQ6P988 496 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 VHLLQ6RSH7 139 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 DPP10Q8N608 796 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 GPR150Q8NGU9 434 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 WNK4Q96J92 1243 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 TRIM45Q9H8W5 580 aaPredicted RBP9.21□□□□□ -0.93
UBR4-201ENST00000375218 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 FKBPLQ9UIM3 349 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 GAB2Q9UQC2 676 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 FAM227AF5H4B4 570 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 J3QW42 95 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ADAM20O43506 726 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CA12O43570 354 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ATP9AO75110 1047 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 SPDEFO95238 335 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 CPB1P15086 417 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 HSPA7P48741 367 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 ATP12AP54707 1039 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 PTK2Q05397 1052 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 TBCCQ15814 346 aa9.21□□□□□ -0.93
UBR4-201ENST00000375218 EZH2Q15910 746 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms