RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 RASSF1Q9NS23 344 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF214Q9UL59 606 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 HMBSP08397 361 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 BGNP21810 368 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ARF5P84085 180 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SWI5Q1ZZU3 235 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MCOLN3Q8TDD5 553 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 HDAC7Q8WUI4 952 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 KLF6Q99612 283 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 GMIPQ9P107 970 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 TRHDEQ9UKU6 1024 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 M0QYT0 321 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CHST10O43529 356 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SDC2P34741 201 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 LHX1P48742 406 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CLK3P49761 638 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 LYPLAL1Q5VWZ2 237 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 RBM43Q6ZSC3 357 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 TMEM159Q96B96 161 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 COLEC11Q9BWP8 271 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SERPINF2P08697 491 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF7P17097 686 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SNAPC2Q13487 334 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MFSD7Q6UXD7 560 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 BRINP3Q76B58 766 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 THAP2Q9H0W7 228 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 AGPAT3Q9NRZ7 376 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 H7C1W4 665 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SPTBP11277 2137 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 PAPD7Q5XG87 772 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 STK32CQ86UX6 486 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SNIP1Q8TAD8 396 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MRPS31Q92665 395 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 A0A087WZ62 844 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CYP7B1O75881 506 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 RPL10AP62906 217 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.053e-6■■□□□ 12.4
HSPG2-203ENST00000374695 TBL1YQ9BQ87 522 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 IKZF3Q9UKT9 509 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 LYVE1Q9Y5Y7 322 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 OR56A5P0C7T3 313 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ITIH1P19827 911 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 POLR2LP62875 67 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF662Q6ZS27 426 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ADGRF2Q8IZF7 708 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 GSDMCQ9BYG8 508 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SMURF2Q9HAU4 748 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SLC9A8Q9Y2E8 581 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SMCO3A2RU48 225 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 GATBO75879 557 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 SEMA3DO95025 777 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 PSMG1O95456 288 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 NUDT14O95848 222 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CYP2A6P11509 494 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MTAPQ13126 283 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CYP2A13Q16696 494 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 R3HCC1LQ7Z5L2 792 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MTMR12Q9C0I1 747 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 DMTF1Q9Y222 760 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 GPR182O15218 404 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 ITGB3P05106 788 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 AKR1D1P51857 326 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 EPHB3P54753 998 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 BST2Q10589 180 aaKnown RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 FIGNQ5HY92 759 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 MUC13Q9H3R2 512 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 CYP4F12Q9HCS2 524 aa8.5□□□□□ -1.05
HSPG2-203ENST00000374695 STOX2Q9P2F5 926 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-203ENST00000374695 PRODHO43272 600 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 RPA1P27694 616 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 STARD3Q14849 445 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 N4BP2L1Q5TBK1 243 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 CHST13Q8NET6 341 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 IL22Q9GZX6 179 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ABCB10Q9NRK6 738 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 AP4E1Q9UPM8 1137 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 FCHO1O14526 889 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SNRNP200O75643 2136 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 REXO1L1PQ8IX06 675 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 EMC1Q8N766 993 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 CAB39LQ9H9S4 337 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 JMJD4Q9H9V9 463 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 NARFQ9UHQ1 456 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MTMR2Q13614 643 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SLC45A4Q5BKX6 768 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SHQ1Q6PI26 577 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 LOC110117498-PIK3R3F6TDL0 507 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SERPINB7O75635 380 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 CBFBQ13951 182 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MSANTD1Q6ZTZ1 278 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ZCCHC9Q8N567 271 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms