RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CCL22O00626 93 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 HNRNPCL1O60812 293 aaKnown RBP17.39■□□□□ 0.37
RXRB-201ENST00000374680 THPOP40225 353 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 VHLP40337 213 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 MPP1Q00013 466 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 PDPK2PQ6A1A2 396 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.37
RXRB-201ENST00000374680 SLC41A1Q8IVJ1 513 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 RNF148Q8N7C7 305 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 SLC26A7Q8TE54 656 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 RBBP8Q99708 897 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 IGSF9Q9P2J2 1179 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 PPM1HQ9ULR3 514 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 CHRNA1P02708 482 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 MPSTP25325 297 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
RXRB-201ENST00000374680 XKR4Q5GH76 650 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 RPS27LQ71UM5 84 aaKnown RBP17.39■□□□□ 0.37
RXRB-201ENST00000374680 CCNYL1Q8N7R7 359 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 KCTD4Q8WVF5 259 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 VPS39Q96JC1 886 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 OR52B2Q96RD2 323 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 EPAS1Q99814 870 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 CPNE1Q99829 537 aa17.39■□□□□ 0.37
RXRB-201ENST00000374680 FAM124BQ9H5Z6 455 aaPredicted RBP17.39■□□□□ 0.37
RXRB-201ENST00000374680 ZNF487B1APH4 448 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 MX2P20592 715 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 EPHA3P29320 983 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 ESRP1Q6NXG1 681 aaKnown RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 ARCQ7LC44 396 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 ZNF419Q96HQ0 510 aaPredicted RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 RCOR3Q9P2K3 495 aaPredicted RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 RUVBL2Q9Y230 463 aaKnown RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 DPPA5A6NC42 116 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 AIM2O14862 343 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 UBTFL6P0CB48 400 aaPredicted RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 ARSAP15289 507 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 CNTFP26441 200 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 NAGLUP54802 743 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 ITKQ08881 620 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 TUBB3Q13509 450 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 SPANXN3Q5MJ09 141 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 GRTP1Q5TC63 336 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 TMEM198Q66K66 360 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 CAPRIN2Q6IMN6 1127 aaKnown RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 TMEM154Q6P9G4 183 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 DEFB107AQ8IZN7 70 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 ARHGAP24Q8N264 748 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 DQX1Q8TE96 717 aaKnown RBP17.38■□□□□ 0.37
RXRB-201ENST00000374680 KCTD13Q8WZ19 329 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 DLGAP2Q9P1A6 1054 aa17.38■□□□□ 0.37
RXRB-201ENST00000374680 TNPO2O14787 897 aaKnown RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 MGEA5O60502 916 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 ATP6V1C1P21283 382 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 LRPAP1P30533 357 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 SCNN1AP37088 669 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 MAXP61244 160 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 MRPS6P82932 125 aaKnown RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 PPIDQ08752 370 aaKnown RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 HPS6Q86YV9 775 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 ZNF333Q96JL9 665 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 FICDQ9BVA6 458 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 GATA5Q9BWX5 397 aaPredicted RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 NUF2Q9BZD4 464 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 NMRAL1Q9HBL8 299 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 CNGB3Q9NQW8 809 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 PLA2G4CQ9UP65 541 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 DICER1Q9UPY3 1922 aaKnown RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 EME2A4GXA9 379 aaPredicted RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 HAS3O00219 553 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 CFLARO15519 480 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 GRIK1P39086 918 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 LHX1P48742 406 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 TRIM32Q13049 653 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 C6orf163Q5TEZ5 329 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 OR10T2Q8NGX3 314 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 FAM136AQ96C01 138 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 RTP3Q9BQQ7 232 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 TLK1Q9UKI8 766 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 AURKAO14965 403 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 ZBTB14O43829 449 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 TM7SF2O76062 418 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 ZCCHC18P0CG32 403 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 ZNF157P51786 506 aaPredicted RBP17.37■□□□□ 0.37
RXRB-201ENST00000374680 LIMK2P53671 638 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 CNGA3Q16281 694 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 PPM1LQ5SGD2 360 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 MORN1Q5T089 497 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 FRMD7Q6ZUT3 714 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 LIMS2Q7Z4I7 341 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 LMNTD2Q8IXW0 634 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 PPFIBP2Q8ND30 876 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 SH3TC2Q8TF17 1288 aa17.37■□□□□ 0.37
RXRB-201ENST00000374680 UPF1Q92900 1129 aaKnown RBP eCLIP17.37■□□□□ 0.376e-8■■■■■ 38.8
RXRB-201ENST00000374680 NEMP2A6NFY4 417 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms