RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 PNMA8CA0A1B0GUJ8 204 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RGSL1A5PLK6 1076 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 GLTPD2A6NH11 291 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 TRIM38O00635 465 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RGS14O43566 566 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 ANXA6P08133 673 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RHOCP08134 193 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 PTPN9P43378 593 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 TBX4P57082 545 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 FAAP100Q0VG06 881 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 HABP4Q5JVS0 413 aaKnown RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 KCNT2Q6UVM3 1135 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 TSHZ1Q6ZSZ6 1077 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 SLC25A41Q8N5S1 370 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RTKNQ9BST9 563 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 ASCC2Q9H1I8 757 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 RSL24D1Q9UHA3 163 aaKnown RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 COL11A1P12107 1806 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 COL2A1P02458 1487 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 TULP2O00295 520 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RASSF9O75901 435 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RECQL5O94762 991 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 LDLRP01130 860 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 CYP2A6P11509 494 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 AKR1A1P14550 325 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 OVGP1Q12889 678 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 MMRN1Q13201 1228 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 MFSD10Q14728 455 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 STXBP5Q5T5C0 1151 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 DEFB107AQ8IZN7 70 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 CERS2Q96G23 380 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 NSMCE2Q96MF7 247 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 ATP11BQ9Y2G3 1177 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 A0A0B4J269 797 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 A0A1W2PQ67 120 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 SNAP91O60641 907 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RAMP2O60895 175 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 UBA1P22314 1058 aaKnown RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 ADRA1DP25100 572 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 PIK3R1P27986 724 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 RIPPLY1Q0D2K3 151 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 FASTKQ14296 549 aaKnown RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 EID3Q8N140 333 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 UBE2E3Q969T4 207 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 GIT1Q9Y2X7 761 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 DYRK1BQ9Y463 629 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 MTF2Q9Y483 593 aaPredicted RBP10.78□□□□□ -0.68
PGK1-201ENST00000373316 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
PGK1-201ENST00000373316 ZNF487B1APH4 448 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 JCHAINP01591 159 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 RPN2P04844 631 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 NPR3P17342 541 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 MRPL28Q13084 256 aaKnown RBP10.77□□□□□ -0.68
PGK1-201ENST00000373316 KIZQ2M2Z5 673 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 MDH1BQ5I0G3 518 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 FBXO39Q8N4B4 442 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 MRPS31Q92665 395 aaKnown RBP10.77□□□□□ -0.68
PGK1-201ENST00000373316 POLR1EQ9GZS1 481 aaKnown RBP10.77□□□□□ -0.68
PGK1-201ENST00000373316 SETD4Q9NVD3 440 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 RBM22Q9NW64 420 aaKnown RBP eCLIP10.77□□□□□ -0.682e-8■■■■■ 45.8
PGK1-201ENST00000373316 H2AFY2Q9P0M6 372 aaPredicted RBP10.77□□□□□ -0.68
PGK1-201ENST00000373316 ARHGAP28Q9P2N2 729 aa10.77□□□□□ -0.68
PGK1-201ENST00000373316 RCCD1A6NED2 376 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 EPHB6O15197 1021 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 CNOT3O75175 753 aaKnown RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 NOL4O94818 638 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 LBPP18428 481 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 CLK1P49759 484 aaKnown RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 PSEN2P49810 448 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 SERPINH1P50454 418 aaKnown RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 CDH18Q13634 790 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 SPATS1Q496A3 300 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 KCNT1Q5JUK3 1230 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 TTC23Q5W5X9 447 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 PACS2Q86VP3 889 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 PROSER1Q86XN7 944 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 STAG3L4Q8TBR4 150 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 COPS5Q92905 334 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 PAPOLBQ9NRJ5 636 aaKnown RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 TMCC3Q9ULS5 477 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 ZBBXA8MT70 800 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 KPNA4O00629 521 aaPredicted RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 MRASO14807 208 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 FKBP9O95302 570 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 BMP10O95393 424 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 PPIBP23284 216 aaKnown RBP10.77□□□□□ -0.69
PGK1-201ENST00000373316 NEK3P51956 506 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 TNK2Q07912 1038 aa10.77□□□□□ -0.69
PGK1-201ENST00000373316 DMC1Q14565 340 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms