RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 CIDEBQ9UHD4 219 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 HBS1LQ9Y450 684 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 TTLL3Q9Y4R7 772 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 GBF1Q92538 1859 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 TCRBV7S3A2A0A539 114 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 HIDE1A8MVS5 230 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 E5RJQ4 531 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 M0QZQ0 153 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 MED7O43513 233 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 LRCH4O75427 683 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 ENDOD1O94919 500 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 CTSAP10619 480 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 RBP3P10745 1247 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 ODC1P11926 461 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 RPL17P18621 184 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 FGFR3P22607 806 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 YWHAGP61981 247 aaKnown RBP eCLIP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 BASP1P80723 227 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 ROR1Q01973 937 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 STX3Q13277 289 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 ZNF667Q5HYK9 610 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 WSCD1Q658N2 575 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 RBM23Q86U06 439 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 RASSF3Q86WH2 238 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 SLC4A11Q8NBS3 891 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 APPL2Q8NEU8 664 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 NAT14Q8WUY8 206 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 MRPL38Q96DV4 380 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 LMAN2LQ9H0V9 348 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 C12orf65Q9H3J6 166 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
TSPAN1-201ENST00000372003 CITO14578 2027 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 SYN3O14994 580 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 PER2O15055 1255 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 RFPL1O75677 317 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 BAG2O95816 211 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 ZCCHC18P0CG32 403 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 KRT3P12035 628 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 PAX3P23760 479 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 AQP5P55064 265 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 CDH8P55286 799 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 YWHAHQ04917 246 aaPredicted RBP11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 CHI3L2Q15782 390 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 SOWAHAQ2M3V2 549 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 KIAA0319Q5VV43 1072 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 METTL23Q86XA0 190 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 RFX6Q8HWS3 928 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 MRPL43Q8N983 215 aaKnown RBP11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 DGCR14Q96DF8 476 aaKnown RBP11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 TTC1Q99614 292 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 DNAJC28Q9NX36 388 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 PTTG2Q9NZH5 202 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.54
TSPAN1-201ENST00000372003 CHD7Q9P2D1 2997 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 PRR5-ARHGAP8B1AHC4 643 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 DENRO43583 198 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 APOEP02649 317 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ALOX15P16050 662 aaPredicted RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 L1CAMP32004 1257 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 CPA2P48052 419 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ARPP19P56211 112 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 YWHAZP63104 245 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ARHGAP8P85298 464 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 PSMD5Q16401 504 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 CTXN3Q4LDR2 81 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ANKRD20A4Q4UJ75 823 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 TMEM259Q4ZIN3 620 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 RABGAP1LQ5R372 815 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 OVOS1Q6IE37 1185 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 CDHR3Q6ZTQ4 885 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ANKS3Q6ZW76 656 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 IGDCC3Q8IVU1 814 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 FAM71DQ8N9W8 422 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 KCTD6Q8NC69 237 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 PIWIL2Q8TC59 973 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 RILPQ96NA2 401 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 Q9H521 79 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms