RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SP110Q9HB58 689 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GOLGA6AQ9NYA3 693 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 CHD7Q9P2D1 2997 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 F5H423 210 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 RHOP08100 348 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 NFKB1P19838 968 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 PHBP35232 272 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 CCR2P41597 374 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 MAGEA3P43357 314 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 ZXDBP98169 803 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 SERINC3Q13530 473 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 STAT4Q14765 748 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 PPP2R2DQ66LE6 453 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 HTR3DQ70Z44 454 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 CNTD1Q8N815 330 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 NKX2-4Q9H2Z4 354 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 CENPHQ9H3R5 247 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 VPS37BQ9H9H4 285 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 SH3BP1Q9Y3L3 701 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 TEX264Q9Y6I9 313 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 NYNRINQ9P2P1 1898 aaKnown RBP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 TRDMT1O14717 391 aaKnown RBP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 AVILO75366 819 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 IL10RBQ08334 325 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 ZNF177Q13360 481 aaPredicted RBP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 LRRC8BQ6P9F7 803 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 RBM23Q86U06 439 aaKnown RBP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 USP33Q8TEY7 942 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 ATP6V1G3Q96LB4 118 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 PRKD2Q9BZL6 878 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 RBM22Q9NW64 420 aaKnown RBP eCLIP26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 MYO7AQ13402 2215 aa26.85■■□□□ 1.89
ATPAF1-202ENST00000371937 TYW5A2RUC4 315 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 HMGB1P1B2RPK0 211 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 RASGRF2O14827 1237 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 PSMD3O43242 534 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 CACNG3O60359 315 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 TCEA3O75764 348 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 AP2A1O95782 977 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 IVLP07476 585 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 ELK3P41970 407 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 TTMPQ5BVD1 217 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 STXBP5Q5T5C0 1151 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 GPR158Q5T848 1215 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 ZNF534Q76KX8 674 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 SETD3Q86TU7 594 aaPredicted RBP26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 TLE6Q9H808 572 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 CFAP97Q9P2B7 532 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 ARHGAP26Q9UNA1 814 aa26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 AAR2Q9Y312 384 aaKnown RBP26.84■■□□□ 1.89
ATPAF1-202ENST00000371937 TSPAN3O60637 253 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 SUN1O94901 812 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 IFNAR2P48551 515 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 CBX1P83916 185 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 GNA12Q03113 381 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 MTM1Q13496 603 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 FAM217AQ8IXS0 508 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 ARNTL2Q8WYA1 636 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 TASP1Q9H6P5 420 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 SLC28A3Q9HAS3 691 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 GLOD4Q9HC38 313 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 VPS18Q9P253 973 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 ZMYM5Q9UJ78 669 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 CHMP2BQ9UQN3 213 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 ILVBLA1L0T0 632 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 J3KR12 359 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 POLR3GO15318 223 aaPredicted RBP26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 SPAG6O75602 509 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 PEX11BO96011 259 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 AVPR1AP37288 418 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 AGBL2Q5U5Z8 902 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 MARC1Q5VT66 337 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 C3orf62Q6ZUJ4 267 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 HJURPQ8NCD3 748 aaPredicted RBP26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 ARHGEF2Q92974 986 aaKnown RBP26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 FCRL5Q96RD9 977 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 GORASP1Q9BQQ3 440 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 WDR83Q9BRX9 315 aaKnown RBP26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 TBC1D30Q9Y2I9 924 aa26.83■■□□□ 1.89
ATPAF1-202ENST00000371937 CCDC195A0A1B0GUA6 201 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 TLDC2A0PJX2 215 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 ANXA9O76027 345 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 KCTD11Q693B1 232 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 ADGRD2Q7Z7M1 963 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 CMTM8Q8IZV2 173 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 PABPC5Q96DU9 382 aaKnown RBP26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 TCEAL4Q96EI5 215 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 TMA16Q96EY4 203 aaKnown RBP26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 PGM2Q96G03 612 aa26.82■■□□□ 1.88
ATPAF1-202ENST00000371937 NRG2O14511 850 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF197O14709 1029 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 ACVRL1P37023 503 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 ETFBP38117 255 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 GRIA1P42261 906 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 SGSHP51688 502 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 GPX6P59796 221 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 TEAD2Q15562 447 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 LRRC40Q9H9A6 602 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 TTLL3Q9Y4R7 772 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms