RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DEFA3P59666 94 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 POTEHQ6S545 545 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 FNDC5Q8NAU1 212 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 OR6Y1Q8NGX8 325 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 RDH11Q8TC12 318 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 SLCO1B3Q9NPD5 702 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 MPP6Q9NZW5 540 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CCDC167Q9P0B6 97 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 DYRK1BQ9Y463 629 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 LTN1O94822 1766 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 H3BMM5 538 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 LRCH4O75427 683 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CRADDP78560 199 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 TRPM4Q8TD43 1214 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ACE2Q9BYF1 805 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 R3HDM2Q9Y2K5 976 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 PCDHB12Q9Y5F1 795 aa12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 ATXN2Q99700 1313 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-201ENST00000370966 SMIM35A0A1B0GVV1 85 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ARHGEF9O43307 516 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 LDLRP01130 860 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PLK1P53350 603 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 IL2P60568 153 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PLD1Q13393 1074 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PABPC1LQ4VXU2 614 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 SLC4A11Q8NBS3 891 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 LGMNQ99538 433 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 EPS8L2Q9H6S3 715 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PSMD12O00232 456 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 STK25O00506 426 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 IGSF6O95976 241 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CST3P01034 146 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 GJB1P08034 283 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 RAG1P15918 1043 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CYP2A7P20853 494 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ATP6V1B2P21281 511 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 GABRB2P47870 512 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 FKBP1BP68106 108 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ASTE1Q2TB18 679 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ARMC12Q5T9G4 340 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF557Q8N988 423 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 MCOLN3Q8TDD5 553 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 NOCTQ9UK39 431 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 AFDNP55196 1824 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 BTN3A1O00481 513 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 INPP4BO15327 924 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CCNT2O60583 730 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 KATNA1O75449 491 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PDE5AO76074 875 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 TNFAIP8O95379 198 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 LBPP18428 481 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 DGKZQ13574 1117 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF572Q7Z3I7 529 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 AGAP11Q8TF27 550 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM84AQ96KN4 292 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 NR1H4Q96RI1 486 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 TMEM79Q9BSE2 394 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CATSPERZQ9NTU4 200 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 RAP2CQ9Y3L5 183 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 GNG14A0A1W2PPG7 69 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 MEI4A8MW99 385 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 MSCO60682 206 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CDKN2BP42772 138 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 BCL2L1Q07817 233 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM45BPQ6NSW5 357 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 NET1Q7Z628 596 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 MILR1Q7Z6M3 343 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM45AQ8TCE6 357 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 P2RY11Q96G91 374 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 CIPCQ9C0C6 399 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 SMPD4Q9NXE4 827 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 NUDT5Q9UKK9 219 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 TMCC3Q9ULS5 477 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 PLA2G4CQ9UP65 541 aa12.03□□□□□ -0.48
DEPDC1-201ENST00000370966 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 TPSB2P20231 275 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 SFSWAPQ12872 951 aaKnown RBP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 TPSAB1Q15661 275 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 GJC2Q5T442 439 aaPredicted RBP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 XYLT1Q86Y38 959 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 SLC44A1Q8WWI5 657 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 PRCCQ92733 491 aaPredicted RBP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 TMEM159Q96B96 161 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 C2orf49Q9BVC5 232 aaPredicted RBP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 ZCCHC2Q9C0B9 1178 aaKnown RBP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 FBXO5Q9UKT4 447 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms