RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 ATAD3BQ5T9A4 648 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 SRRM1Q8IYB3 904 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 RASGEF1CQ8N431 466 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 UBL4BQ8N7F7 174 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 KRT35Q92764 455 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 TSNARE1Q96NA8 513 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 TRMT13Q9NUP7 481 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 MRPL39Q9NYK5 338 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 PARP2Q9UGN5 583 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 DPP7Q9UHL4 492 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 ATP6V1HQ9UI12 483 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 A0A0A6YYK5 440 aaPredicted RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 TMX2-CTNND1H3BSU7 103 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 PQBP1O60828 265 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 FAM58BPP0C7Q3 252 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 TSPAN7P41732 249 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 CLCN3P51790 818 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 PTENP60484 403 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 HIC1Q14526 733 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 SQLEQ14534 574 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 LHX8Q68G74 356 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 DUPD1Q68J44 220 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 SCARA3Q6AZY7 606 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 IQSEC1Q6DN90 963 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 ABHD15Q6UXT9 468 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 BEND7Q8N7W2 519 aaPredicted RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 ASCC1Q8N9N2 400 aaKnown RBP11.07□□□□□ -0.64
TWNK-202ENST00000370228 RFWD2Q8NHY2 731 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 MBOAT7Q96N66 472 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 RIT2Q99578 217 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 HSD17B14Q9BPX1 270 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 RUSC1Q9BVN2 902 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 GHITMQ9H3K2 345 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.07□□□□□ -0.64
TWNK-202ENST00000370228 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
TWNK-202ENST00000370228 MGAMO43451 1857 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 ZNF701M0R085 212 aaPredicted RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 EPN2O95208 641 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 FGFR4P22455 802 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 ZNF33BQ06732 778 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CALCOCO2Q13137 446 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 DHX34Q14147 1143 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 LEXMQ3ZCV2 418 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 SEL1L2Q5TEA6 688 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 C1orf146Q5VVC0 180 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 ZDHHC24Q6UX98 284 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CDR2LQ86X02 465 aaPredicted RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 JAMLQ86YT9 394 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 HDAC2Q92769 488 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 C12orf43Q96C57 262 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CNBD2Q96M20 576 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CLSTN3Q9BQT9 956 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 FANCFQ9NPI8 374 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 AVENQ9NQS1 362 aaPredicted RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 VPS45Q9NRW7 570 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 EPS15L1Q9UBC2 864 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 SLC7A8Q9UHI5 535 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CPSF3Q9UKF6 684 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 CAPN14A8MX76 684 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 AKAP3O75969 853 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 PSAPP07602 524 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 RETP07949 1114 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 INSRRP14616 1297 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 MUTP22033 750 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 HOXC13P31276 330 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 TRIP10Q15642 601 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 RGS9BPQ6ZS82 235 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 IGFN1Q86VF2 1251 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 PYDC1Q8WXC3 89 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 HES6Q96HZ4 224 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 PAWRQ96IZ0 340 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 SMYD3Q9H7B4 428 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 LIN7BQ9HAP6 207 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 NTN4Q9HB63 628 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 SPC25Q9HBM1 224 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CYP26B1Q9NR63 512 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 NR2E1Q9Y466 385 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 PDXKO00764 312 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 TM7SF2O76062 418 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 VTNP04004 478 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 ITGAXP20702 1163 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 CASP4P49662 377 aa11.06□□□□□ -0.64
TWNK-202ENST00000370228 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
TWNK-202ENST00000370228 LAMC2Q13753 1193 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms