RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CLCN6P51797 869 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 HNRNPDQ14103 355 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 TEX44Q53QW1 395 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ANKRD20A2Q5SQ80 823 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 LY6G5CQ5SRR4 150 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ANKRD20A1Q5TYW2 823 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ANKRD20A3Q5VUR7 823 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 TANGO2Q6ICL3 276 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ARHGEF18Q6ZSZ5 1173 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 GLIS1Q8NBF1 620 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 IFT81Q8WYA0 676 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 MAML1Q92585 1016 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 BHMTQ93088 406 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ATP13A1Q9HD20 1204 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ARGLU1Q9NWB6 273 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 CXorf51AA0A1B0GTR3 108 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ESYT3A0FGR9 886 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 H3BQ06 376 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 KDELR3O43731 214 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ERLIN1O75477 346 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 NEBLO76041 1014 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ZSCAN5DPP0CG00 497 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 CCNB1P14635 433 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 TYRP14679 529 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ETS1P14921 441 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 PSMC3P17980 439 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 KCNA5P22460 613 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 PTPN3P26045 913 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RPL21P46778 160 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 VPS41P49754 854 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 VSNL1P62760 191 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 GAD2Q05329 585 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 WASHC5Q12768 1159 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 DHCR24Q15392 516 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 TMCO4Q5TGY1 634 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 RHBDF2Q6PJF5 856 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ARHGAP36Q6ZRI8 547 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 Q7L0L9 218 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 LRRN4Q8WUT4 740 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 FEM1AQ9BSK4 669 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 C2orf49Q9BVC5 232 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 ACE2Q9BYF1 805 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 PLK2Q9NYY3 685 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 VPS28Q9UK41 221 aa12.58□□□□□ -0.4
TUBE1-202ENST00000368662 TPX2Q9ULW0 747 aaKnown RBP12.58□□□□□ -0.4
TUBE1-202ENST00000368662 CCDC151A5D8V7 595 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 DNALI1O14645 258 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 HOXC11O43248 304 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 ADH5P11766 374 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 IVDP26440 423 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 ACVRL1P37023 503 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 FDFT1P37268 417 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 NR1H3Q13133 447 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 BRD3Q15059 726 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 CCDC85BQ15834 202 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 MAP9Q49MG5 647 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 FSCBQ5H9T9 825 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 VITQ6UXI7 678 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 CCNI2Q6ZMN8 369 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-202ENST00000368662 BBS5Q8N3I7 341 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 CCDC110Q8TBZ0 833 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 HLA-CQ95604 372 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 ACDQ96AP0 544 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 PPP1R2P1Q96PQ5 205 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 FAM83CQ9BQN1 747 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 CHD5Q8TDI0 1954 aa12.57□□□□□ -0.4
TUBE1-202ENST00000368662 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 JCHAINP01591 159 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CYP17A1P05093 508 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PLK1P53350 603 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 GEMIN4P57678 1058 aaKnown RBP12.56□□□□□ -0.4
TUBE1-202ENST00000368662 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PARP6Q2NL67 630 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PID1Q7Z2X4 250 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 HOOK3Q86VS8 718 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms