RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 JUNDP17535 347 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 MZF1P28698 734 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 UGT1A3P35503 534 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 SLC12A3P55017 1021 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 FZD2Q14332 565 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 MPP7Q5T2T1 576 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 FAM46CQ5VWP2 391 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 PARGQ86W56 976 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 STK40Q8N2I9 435 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 OR6C4Q8NGE1 309 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 KIAA1143Q96AT1 154 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 TNIP3Q96KP6 325 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 MTMR12Q9C0I1 747 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 PARVGQ9HBI0 331 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 RBAKQ9NYW8 714 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 CLIC5Q9NZA1 410 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 IPO11Q9UI26 975 aaKnown RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 GGT7Q9UJ14 662 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 PCDHGA3Q9Y5H0 932 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 SHANK1Q9Y566 2161 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 NPHP3-ACAD11A0A0J9YXS1 232 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 TTC34A8MYJ7 566 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 LMO7DNF2Z398 122 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 PRPF6O94906 941 aaKnown RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 TNNC2P02585 160 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ANXA6P08133 673 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 SLFN14P0C7P3 912 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ZNF131P52739 623 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 TRIM29Q14134 588 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ELAVL3Q14576 367 aaKnown RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 INPP5JQ15735 1006 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 DUOXA2Q1HG44 320 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ARSHQ5FYA8 562 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 CEP135Q66GS9 1140 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 GDF7Q7Z4P5 450 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ZMIZ2Q8NF64 920 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 MRGPRX3Q96LB0 322 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 NOX5Q96PH1 765 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 SMOQ99835 787 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 MYOCQ99972 504 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 CPEB1Q9BZB8 566 aaKnown RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ST6GALNAC4Q9H4F1 302 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 GPN2Q9H9Y4 310 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 CYP4F12Q9HCS2 524 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 GPR27Q9NS67 375 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 INTS13Q9NVM9 706 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 RASAL2Q9UJF2 1139 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 LIMCH1Q9UPQ0 1083 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 ERVW-1Q9UQF0 538 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 CCDC168Q8NDH2 2452 aa10.69□□□□□ -0.7
TUBE1-201ENST00000368657 PRRC2CQ9Y520 2896 aaKnown RBP10.69□□□□□ -0.7
TUBE1-201ENST00000368657 DUX1O43812 170 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 BEST1O76090 585 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 FAM13AO94988 1023 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 PLA2G4BP0C869 781 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 FDPSP14324 419 aaKnown RBP10.68□□□□□ -0.7
TUBE1-201ENST00000368657 PRLRP16471 622 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 ITGA3P26006 1051 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 OAS2P29728 719 aaKnown RBP10.68□□□□□ -0.7
TUBE1-201ENST00000368657 CD70P32970 193 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 ADKP55263 362 aaKnown RBP10.68□□□□□ -0.7
TUBE1-201ENST00000368657 MAP3K7CLP57077 242 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 CLDN2P57739 230 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 CCDC15Q0P6D6 951 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 EFEMP1Q12805 493 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 SURF1Q15526 300 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 ZRANB3Q5FWF4 1079 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 SDR16C5Q8N3Y7 309 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 C4orf32Q8N8J7 132 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 SCG3Q8WXD2 468 aaKnown RBP10.68□□□□□ -0.7
TUBE1-201ENST00000368657 CCDC74AQ96AQ1 378 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 PLD4Q96BZ4 506 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 HDAC11Q96DB2 347 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 BMFQ96LC9 184 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 TBATAQ96M53 351 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 PDE11AQ9HCR9 933 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 KRT82Q9NSB4 513 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 KLF15Q9UIH9 416 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 STOML2Q9UJZ1 356 aa10.68□□□□□ -0.7
TUBE1-201ENST00000368657 TACC2O95359 2948 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 A0A1W2PQU0 124 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 YY2O15391 372 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 SORBS2O94875 1100 aaKnown RBP10.67□□□□□ -0.7
TUBE1-201ENST00000368657 TCN2P20062 427 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 MAP4P27816 1152 aaKnown RBP10.67□□□□□ -0.7
TUBE1-201ENST00000368657 PTGER4P35408 488 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 NNMTP40261 264 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 CSKP41240 450 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 HDAC4P56524 1084 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 TNNC1P63316 161 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 ZNF284Q2VY69 593 aa10.67□□□□□ -0.7
TUBE1-201ENST00000368657 WDR72Q3MJ13 1102 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms