RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 RNF44Q7L0R7 432 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ANAPC2Q9UJX6 822 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MAFFQ9ULX9 164 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 IQSEC2Q5JU85 1478 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PEX11AO75192 247 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ITIH1P19827 911 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 UGP2Q16851 508 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 SWI5Q1ZZU3 235 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PPM1HQ9ULR3 514 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRKD3O94806 890 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ATF6P18850 670 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 VBP1P61758 197 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 DLG1Q12959 904 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CIAPIN1Q6FI81 312 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 POLNQ7Z5Q5 900 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 KCNS3Q9BQ31 491 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 NDOR1Q9UHB4 597 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 H3BM21 787 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 NCK1P16333 377 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 NPR2P20594 1047 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TCF12Q99081 682 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CORO1BQ9BR76 489 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 NMUR2Q9GZQ4 415 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MIR1-1HGQ9H1L0 117 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TTYH1Q9H313 450 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 MYMKA6NI61 221 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 IL4RP24394 825 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PDHA2P29803 388 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRMT9Q6P2P2 845 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PCDH20Q8N6Y1 951 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CINPQ9BW66 212 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SPON1Q9HCB6 807 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SEC31BQ9NQW1 1179 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 AKAP6Q13023 2319 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 HOXB7P09629 217 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SAMD4BQ5PRF9 694 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM182BQ5T319 152 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZNF671Q8TAW3 534 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 TNIP3Q96KP6 325 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ILVBLA1L0T0 632 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 MGAT4DA6NG13 374 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRLRP16471 622 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ANXA11P50995 505 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PDPRQ8NCN5 879 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 RGS18Q9NS28 235 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 COMMD8Q9NX08 183 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 MRASO14807 208 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 NR4A2P43354 598 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 C1DQ13901 141 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CCDC185Q8N715 623 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 FANCFQ9NPI8 374 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 GNPTGQ9UJJ9 305 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARHGEF33A8MVX0 844 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L22D6RA61 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L17D6RBQ6 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L19D6RCP7 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L20D6RJB6 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 USP17L24Q0WX57 530 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 RNF146Q9NTX7 359 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 MLH3Q9UHC1 1453 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 AGPSO00116 658 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PDE8BO95263 885 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 STAU1O95793 577 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CNPP09543 421 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 MAZP56270 477 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CYP4F8P98187 520 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDC73Q6P1J9 531 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CYP4Z2PQ8N1L4 340 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CMTM6Q9NX76 183 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDH1P12830 882 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SLC2A7Q6PXP3 512 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 AMER2Q8N7J2 671 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 CADM1Q9BY67 442 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ABCB9Q9NP78 766 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms