RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PREPLQ4J6C6 727 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 FSCBQ5H9T9 825 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 FAM217AQ8IXS0 508 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 SEC14L1Q92503 715 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 MSLNLQ96KJ4 702 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 SNX24Q9Y343 169 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 TMEM265A0A087WTH1 108 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 WASH4PA8MWX3 477 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 KCNK1O00180 336 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 CHUKO15111 745 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 PFKLP17858 780 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 SP100P23497 879 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 IVDP26440 423 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 OR1E1P30953 314 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 GALNT2Q10471 571 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 AP1B1Q10567 949 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 PRKD1Q15139 912 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 AFMIDQ63HM1 303 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 HMCESQ96FZ2 354 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 MYADMQ96S97 322 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 ERP44Q9BS26 406 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 POMKQ9H5K3 350 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
CAPN9-203ENST00000366666 WNT6Q9Y6F9 365 aa12.51□□□□□ -0.41
CAPN9-203ENST00000366666 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 C5orf60A6NFR6 353 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 F5H423 210 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 TBL1XO60907 577 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 HTR7P34969 479 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ACVRL1P37023 503 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 GARSP41250 739 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 IFT88Q13099 833 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 SYCP2LQ5T4T6 812 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 CCDC121Q6ZUS5 278 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 TMEM25Q86YD3 366 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 UMODL1-AS1Q8N2C9 162 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 CCDC110Q8TBZ0 833 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 TFB1MQ8WVM0 346 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 MYLIPQ8WY64 445 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ASIC4Q96FT7 647 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ZFYVE19Q96K21 471 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ACTL7AQ9Y615 435 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 MAFKO60675 156 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 RASSF9O75901 435 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 FCARP24071 287 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 SERPINB6P35237 376 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 RPL22P35268 128 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 EIF3BP55884 814 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 USP4Q13107 963 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 XRCC4Q13426 336 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 PTK6Q13882 451 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 CRYMQ14894 314 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 WLSQ5T9L3 541 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 FRMD8P1Q9BZ68 369 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
CAPN9-203ENST00000366666 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 SEPT10Q9P0V9 454 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 ASIC3Q9UHC3 531 aa12.5□□□□□ -0.41
CAPN9-203ENST00000366666 J3KR12 359 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 LATS1O95835 1130 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 GLDCP23378 1020 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 HOXD9P28356 352 aaPredicted RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PPIDQ08752 370 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 ZBTB17Q13105 803 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PDK1Q15118 436 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 RABGAP1LQ5R372 815 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 ATAT1Q5SQI0 421 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CXorf57Q6NSI4 855 aaKnown RBP12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 GRK7Q8WTQ7 553 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 CENPTQ96BT3 561 aa12.49□□□□□ -0.41
CAPN9-203ENST00000366666 HDAC11Q96DB2 347 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms