RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SMIM18P0DKX4 95 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 HARS2P49590 506 aaKnown RBP10.79□□□□□ -0.68
SMC3-201ENST00000361804 RPS6KA3P51812 740 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 MTTPP55157 894 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ADAM17P78536 824 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 CEACAM7Q14002 265 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 GRM3Q14832 879 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ARL13AQ5H913 290 aaPredicted RBP10.79□□□□□ -0.68
SMC3-201ENST00000361804 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ST13P4Q8IZP2 240 aaPredicted RBP10.79□□□□□ -0.68
SMC3-201ENST00000361804 TMEM40Q8WWA1 233 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 CMTM5Q96DZ9 223 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 APBA2Q99767 749 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ATXN3LQ9H3M9 355 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 DNAJC28Q9NX36 388 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ZCWPW2A0A1B0GU75 182 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 FBXO21O94952 628 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 PIGNO95427 931 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SBK3P0C264 359 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 INHBCP55103 352 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 PPIL2Q13356 520 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 LAMB3Q13751 1172 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 KCTD2Q14681 263 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 NRF1Q16656 503 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SLC26A9Q7LBE3 791 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 OTOP3Q7RTS5 596 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 DSELQ8IZU8 1212 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SPATA22Q8NHS9 363 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 RBBP8Q99708 897 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 FTHL17Q9BXU8 183 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 VANGL2Q9ULK5 521 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 RECQL4O94761 1208 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PYGLP06737 847 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PTPN1P18031 435 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 CD68P34810 354 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 GNL1P36915 607 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 CTBP1Q13363 440 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC3-201ENST00000361804 SDCCAG8Q86SQ7 713 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 OSTM1Q86WC4 334 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 ERO1BQ86YB8 467 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PCDH20Q8N6Y1 951 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 CCNYL1Q8N7R7 359 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 BHLHE22Q8NFJ8 381 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 EDEM1Q92611 657 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 CENPIQ92674 756 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 SLC45A3Q96JT2 553 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 KLHL32Q96NJ5 620 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 MLPHQ9BV36 600 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 ARHGAP26Q9UNA1 814 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 GAS2O43903 313 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 PTPN3P26045 913 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 GRIA4P48058 902 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 TBCCQ15814 346 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 RBM44Q6ZP01 1051 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 ARHGAP36Q6ZRI8 547 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 SLC41A1Q8IVJ1 513 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 ICA1LQ8NDH6 482 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 SLC7A14Q8TBB6 771 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 MPP4Q96JB8 637 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PKP2Q99959 881 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PCDHAC1Q9H158 963 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 NMRAL1Q9HBL8 299 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 TMEM30AQ9NV96 361 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 DNAJA2O60884 412 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 HNRNPLP14866 589 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC3-201ENST00000361804 ERCC2P18074 760 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 TSPAN8P19075 237 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 NFKB1P19838 968 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 MX2P20592 715 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 FDFT1P37268 417 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 PTPN9P43378 593 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 MPP1Q00013 466 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 TNFAIP2Q03169 654 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 DEUP1Q05D60 604 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 BST2Q10589 180 aaKnown RBP10.78□□□□□ -0.68
SMC3-201ENST00000361804 ALKAL1Q6UXT8 129 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 ARMCX2Q7L311 632 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 BRI3BPQ8WY22 251 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 TNFRSF12AQ9NP84 129 aa10.78□□□□□ -0.68
SMC3-201ENST00000361804 EEF2KO00418 725 aaKnown RBP10.77□□□□□ -0.68
SMC3-201ENST00000361804 AURKAO14965 403 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 NR2C2P49116 596 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 MAP3K7CLP57077 242 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 SNAPC2Q13487 334 aa10.77□□□□□ -0.68
SMC3-201ENST00000361804 FLOT2Q14254 428 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms