RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ARHGAP12Q8IWW6 846 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 USP33Q8TEY7 942 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 FCRL2Q96LA5 508 aaPredicted RBP23.06■■□□□ 1.28
LDB1-201ENST00000361198 MAGED2Q9UNF1 606 aaPredicted RBP23.06■■□□□ 1.28
LDB1-201ENST00000361198 A0A1W2PQ45 241 aaPredicted RBP23.06■■□□□ 1.28
LDB1-201ENST00000361198 A0A1W2PQY0 241 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 CAPN14A8MX76 684 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 H0Y3Z8 333 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 SMNDC1O75940 238 aaKnown RBP eCLIP23.06■■□□□ 1.28
LDB1-201ENST00000361198 GPR15P49685 360 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 NAB1Q13506 487 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 DDR2Q16832 855 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 MANEALQ5VSG8 457 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 CES4AQ5XG92 561 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 TMEM135Q86UB9 458 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.06■■□□□ 1.28
LDB1-201ENST00000361198 RAET1EQ8TD07 263 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 ZNF669Q96BR6 464 aaPredicted RBP23.06■■□□□ 1.28
LDB1-201ENST00000361198 NDFIP2Q9NV92 336 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 STOML1Q9UBI4 398 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 TPP1O14773 563 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 ITGA2BP08514 1039 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 TMPRSS15P98073 1019 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 LHX8Q68G74 356 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 OTOP3Q7RTS5 596 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 STARD7Q9NQZ5 370 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 BIRC5O15392 142 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 ATP9BO43861 1147 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 SNNO75324 88 aaPredicted RBP23.05■■□□□ 1.28
LDB1-201ENST00000361198 HOXD10P28358 340 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 HOXC13P31276 330 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 GRK4P32298 578 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 ACSBG2Q5FVE4 666 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 DCP1BQ8IZD4 617 aaKnown RBP23.05■■□□□ 1.28
LDB1-201ENST00000361198 MCUR1Q96AQ8 359 aa23.05■■□□□ 1.28
LDB1-201ENST00000361198 VWA8A3KMH1 1905 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 ZCWPW2A0A1B0GU75 182 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 MOCS2O96007 188 aaPredicted RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 COG7P83436 770 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 ZNF33AQ06730 810 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 PDE1CQ14123 709 aaPredicted RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 PPP2R5DQ14738 602 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 ALYREFQ86V81 257 aaKnown RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 NUDCD3Q8IVD9 361 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 SLC43A3Q8NBI5 491 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 MFSD3Q96ES6 412 aa23.04■■□□□ 1.28
LDB1-201ENST00000361198 ZNF419Q96HQ0 510 aaPredicted RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 FAM193BQ96PV7 902 aaPredicted RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 CORO1CQ9ULV4 474 aaPredicted RBP23.04■■□□□ 1.28
LDB1-201ENST00000361198 CCDC195A0A1B0GUA6 201 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 TRPA1O75762 1119 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 ACADSP16219 412 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 TPH1P17752 444 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 CHI3L2Q15782 390 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 ANKRD20A4Q4UJ75 823 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.03■■□□□ 1.28
LDB1-201ENST00000361198 ACMSDQ8TDX5 336 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 SLC39A8Q9C0K1 460 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.03■■□□□ 1.28
LDB1-201ENST00000361198 TXNDC16Q9P2K2 825 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 TADA2AO75478 443 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 USP1O94782 785 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 ATP5BP06576 529 aaKnown RBP23.03■■□□□ 1.28
LDB1-201ENST00000361198 BPGMP07738 259 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 CCNCP24863 283 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 CDC25CP30307 473 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 GP5P40197 560 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 IRX4P78413 519 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 PDE1BQ01064 536 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 KPNB1Q14974 876 aaKnown RBP23.03■■□□□ 1.28
LDB1-201ENST00000361198 VARS2Q5ST30 1063 aaKnown RBP23.03■■□□□ 1.28
LDB1-201ENST00000361198 NUP93Q8N1F7 819 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 ATPAF2Q8N5M1 289 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 TSGA13Q96PP4 275 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 TSEN34Q9BSV6 310 aaKnown RBP23.03■■□□□ 1.28
LDB1-201ENST00000361198 WWP1Q9H0M0 922 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 CATSPERBQ9H7T0 1116 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 CHRAC1Q9NRG0 131 aa23.03■■□□□ 1.28
LDB1-201ENST00000361198 KCNU1A8MYU2 1149 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 FGF10O15520 208 aaPredicted RBP23.02■■□□□ 1.28
LDB1-201ENST00000361198 MAFKO60675 156 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 USP46P62068 366 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 DBN1Q16643 649 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 C16orf46Q6P387 395 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 C14orf80Q86SX3 495 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 ARID3BQ8IVW6 561 aaPredicted RBP23.02■■□□□ 1.28
LDB1-201ENST00000361198 SPATA22Q8NHS9 363 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 FUBP3Q96I24 572 aaKnown RBP eCLIP23.02■■□□□ 1.28
LDB1-201ENST00000361198 CAPNS2Q96L46 248 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 AGAP2Q99490 1192 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 CPNE1Q99829 537 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 ZNF395Q9H8N7 513 aaPredicted RBP23.02■■□□□ 1.28
LDB1-201ENST00000361198 ARMCX1Q9P291 453 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 HS3ST4Q9Y661 456 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 GSRP00390 522 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 F7P08709 466 aaPredicted RBP23.02■■□□□ 1.28
LDB1-201ENST00000361198 TUBP50607 506 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 RAP1GDS1P52306 607 aa23.02■■□□□ 1.28
LDB1-201ENST00000361198 NFE2Q16621 373 aaPredicted RBP23.02■■□□□ 1.28
LDB1-201ENST00000361198 STXBP5Q5T5C0 1151 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms