RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 AFMIDQ63HM1 303 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 TMPRSS6Q8IU80 811 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 PLPP6Q8IY26 295 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 CCDC112Q8NEF3 446 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 OR7D4Q8NG98 312 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 HMGB4Q8WW32 186 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 NKD2Q969F2 451 aaPredicted RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 ISG20Q96AZ6 181 aaKnown RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 LRRC19Q9H756 370 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM2-202ENST00000360958 FAM86C1Q9NVL1 165 aa15.28■□□□□ 0.04
TPM2-202ENST00000360958 USP36Q9P275 1121 aaKnown RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 REXO2Q9Y3B8 237 aaKnown RBP15.28■□□□□ 0.04
TPM2-202ENST00000360958 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 SRCP12931 536 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 HLA-EP13747 358 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 GOT1P17174 413 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 ERCC2P18074 760 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 SERPINH1P50454 418 aaKnown RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 VAV2P52735 878 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 ELAVL3Q14576 367 aaKnown RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 MESDQ14696 234 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 PDK2Q15119 407 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 MAP7D1Q3KQU3 841 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 KCNT1Q5JUK3 1230 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 TXNRD3NBQ6F5E7 133 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 CASKIN2Q8WXE0 1202 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 PRCCQ92733 491 aaPredicted RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 PTPRN2Q92932 1015 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 FAM122AQ96E09 287 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 LOXL4Q96JB6 756 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 SPACA7Q96KW9 195 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 RPL10LQ96L21 214 aaKnown RBP15.27■□□□□ 0.04
TPM2-202ENST00000360958 CSPG4P5Q96PW8 444 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 ZNF670Q9BS34 389 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 KLC2Q9H0B6 622 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 PCDH18Q9HCL0 1135 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.04
TPM2-202ENST00000360958 DNAI1Q9UI46 699 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
TPM2-202ENST00000360958 MYO15AQ9UKN7 3530 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 TTC34A8MYJ7 566 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 DCLK1O15075 740 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 KDELR3O43731 214 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 SNAP91O60641 907 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 ACVRL1P37023 503 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 ARF5P84085 180 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 SERINC3Q13530 473 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 DLG2Q15700 870 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 INO80DQ53TQ3 878 aaPredicted RBP15.26■□□□□ 0.03
TPM2-202ENST00000360958 ZNF776Q68DI1 518 aaPredicted RBP15.26■□□□□ 0.03
TPM2-202ENST00000360958 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 C11orf63Q6NUN7 778 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 SLC36A4Q6YBV0 504 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 MAP7D3Q8IWC1 876 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 HSPH1Q92598 858 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 FAF2Q96CS3 445 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 SIPA1Q96FS4 1042 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 CCDC114Q96M63 670 aa15.26■□□□□ 0.03
TPM2-202ENST00000360958 RCCD1A6NED2 376 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 PRR23AA6NEV1 266 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 RASA4BC9J798 803 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 CBX4O00257 560 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 MCF2LO15068 1137 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 ARHGAP6O43182 974 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 DAPK3O43293 454 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 RASA4O43374 803 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 RNASEH1O60930 286 aaKnown RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 SIN3BO75182 1162 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 CD160O95971 181 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 MT-CO1P00395 513 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 IL4RP24394 825 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 OXTRP30559 389 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 TAS2R40P59535 323 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 RPS14P62263 151 aaKnown RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 SFSWAPQ12872 951 aaKnown RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 SIM2Q14190 667 aaPredicted RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 LAIR1Q6GTX8 287 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 USP30Q70CQ3 517 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 DSG4Q86SJ6 1040 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 LRRC49Q8IUZ0 686 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 ARHGAP12Q8IWW6 846 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 PCDH20Q8N6Y1 951 aaKnown RBP15.25■□□□□ 0.03
TPM2-202ENST00000360958 ATP11CQ8NB49 1132 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 FAM131CQ96AQ9 280 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 FAM129BQ96TA1 746 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 PHOX2BQ99453 314 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 SPON2Q9BUD6 331 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 TPSD1Q9BZJ3 242 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
TPM2-202ENST00000360958 SMG5Q9UPR3 1016 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms