RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 RABGAP1LQ5R372 815 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 TAC4Q86UU9 113 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 FAM174AQ8TBP5 190 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 TTC9Q92623 222 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 MED8Q96G25 268 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 CCDC34Q96HJ3 373 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 UCKL1Q9NWZ5 548 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 SARDHQ9UL12 918 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 NAALADL1Q9UQQ1 740 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 PCDHB4Q9Y5E5 795 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 HECTD1Q9ULT8 2610 aa14.25□□□□□ -0.13
VPS29-201ENST00000360579 TCAF2A6NFQ2 919 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 ATP9BO43861 1147 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 LZTS3O60299 673 aaPredicted RBP14.24□□□□□ -0.13
VPS29-201ENST00000360579 PIAS2O75928 621 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 RBMS1P29558 406 aaKnown RBP14.24□□□□□ -0.13
VPS29-201ENST00000360579 AKT2P31751 481 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 ACADSBP45954 432 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 LRMPQ12912 555 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 POM121L1PQ3SYA9 428 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 CCAR2Q8N163 923 aaKnown RBP14.24□□□□□ -0.13
VPS29-201ENST00000360579 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 MAPK15Q8TD08 544 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 RNF34Q969K3 372 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 VCPIP1Q96JH7 1222 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 APOLD1Q96LR9 279 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 NT5C1BQ96P26 610 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 TSG101Q99816 390 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 CALN1Q9BXU9 219 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 ASCL3Q9NQ33 180 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS29-201ENST00000360579 NCKIPSDQ9NZQ3 722 aa14.24□□□□□ -0.13
VPS29-201ENST00000360579 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
VPS29-201ENST00000360579 FAM237AA0A1B0GTK4 181 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 KCNU1A8MYU2 1149 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 SCAMP1O15126 338 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 SLC31A1O15431 190 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 SLC2A3P11169 496 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 HNRNPA2B1P22626 353 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 RPL34P49207 117 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 HNRNPKP61978 463 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS29-201ENST00000360579 FKBP3Q00688 224 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 MTA1Q13330 715 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 LY6DQ14210 128 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 DLG2Q15700 870 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 CCDC114Q96M63 670 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 SEMA4CQ9C0C4 833 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 POPDC2Q9HBU9 364 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 ST7Q9NRC1 585 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 ARMCX3Q9UH62 379 aaPredicted RBP14.23□□□□□ -0.13
VPS29-201ENST00000360579 CA5BQ9Y2D0 317 aa14.23□□□□□ -0.13
VPS29-201ENST00000360579 A0A1W2PQU0 124 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 K7ENP7 123 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 SLC28A2O43868 658 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 WISP1O95388 367 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 TRUB2O95900 331 aaKnown RBP14.22□□□□□ -0.13
VPS29-201ENST00000360579 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 PRLRP16471 622 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 NDUFA8P51970 172 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 CETN1Q12798 172 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 ISXQ2M1V0 245 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 LCE2DQ5TA82 110 aaPredicted RBP14.22□□□□□ -0.13
VPS29-201ENST00000360579 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 INO80CQ6PI98 192 aaPredicted RBP14.22□□□□□ -0.13
VPS29-201ENST00000360579 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 Q6ZVU0 165 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 HORMAD1Q86X24 394 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 OR13H1Q8NG92 308 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 TPCN2Q8NHX9 752 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 IFI44Q8TCB0 444 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 SLC35C1Q96A29 364 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 MED15Q96RN5 788 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 MYOCQ99972 504 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 ZSWIM1Q9BR11 485 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 DYRK4Q9NR20 520 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 PCDHGA8Q9Y5G5 932 aa14.22□□□□□ -0.13
VPS29-201ENST00000360579 NYNRINQ9P2P1 1898 aaKnown RBP14.21□□□□□ -0.13
VPS29-201ENST00000360579 A6NNZ2 444 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 H3BM21 787 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 K7ESM1 405 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 PMM2O15305 246 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 IGLV3-25P01717 112 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 MLLT3P42568 568 aaPredicted RBP14.21□□□□□ -0.13
VPS29-201ENST00000360579 GPD2P43304 727 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 TAS2R38P59533 333 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 YWHAZP63104 245 aaKnown RBP14.21□□□□□ -0.13
VPS29-201ENST00000360579 MEA1Q16626 185 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 ZNF284Q2VY69 593 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 C3orf38Q5JPI3 329 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 PIP5KL1Q5T9C9 394 aa14.21□□□□□ -0.13
VPS29-201ENST00000360579 CXorf57Q6NSI4 855 aaKnown RBP14.21□□□□□ -0.13
VPS29-201ENST00000360579 ZCCHC8Q6NZY4 707 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms