RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ABLIM1O14639 778 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 FCGRTP55899 365 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 KLRC3Q07444 240 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC9A4Q6AI14 798 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SMYD1Q8NB12 490 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC38A2Q96QD8 506 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CNPPD1Q9BV87 410 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TLR8Q9NR97 1041 aaKnown RBP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ANKEF1Q9NU02 776 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CKLFQ9UBR5 152 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SYNPO2Q9UMS6 1093 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 AP1S1P61966 158 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 CREMQ03060 361 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ERMARDQ5T6L9 678 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 FBXO32Q969P5 355 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 MRTO4Q9UKD2 239 aaKnown RBP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 H3BNH8 94 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 MRASO14807 208 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 ACTRT2Q8TDY3 377 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 OSBPL11Q9BXB4 747 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 RAPGEFL1Q9UHV5 662 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 XYLBO75191 536 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 VBP1P61758 197 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
SRGAP3-201ENST00000360413 STX16-NPEPL1H3BU86 382 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 STX16O14662 325 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ENTPD5O75356 428 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC2A4P14672 509 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 SPP2Q13103 211 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 INSCQ1MX18 579 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 CLN6Q9NWW5 311 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 MEIOBQ8N635 442 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 PHF21BQ96EK2 531 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 KCNK4Q9NYG8 393 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 SAMD9LQ8IVG5 1584 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 QSOX1O00391 747 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 CRABP2P29373 138 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 GRIA3P42263 894 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 HERVK_113P62684 666 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 FRG1Q14331 258 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 PAGE2Q7Z2X7 111 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 C17orf102A2RUQ5 167 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 LSM8O95777 96 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC26A2P50443 739 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 CSHL1Q14406 222 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 GJB7Q6PEY0 223 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ACOT9Q9Y305 439 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 RECQL5O94762 991 aaPredicted RBP13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 SFRP1Q8N474 314 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 PHC3Q8NDX5 983 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ZSWIM2Q8NEG5 633 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 FRMD6Q96NE9 622 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 DPY30Q9C005 99 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 CHRNGP07510 517 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM228BP0C875 321 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ITGA2P17301 1181 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 RPL9P32969 192 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 USP46P62068 366 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF613Q6PF04 617 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 KCNN2Q9H2S1 579 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 PTPRHQ9HD43 1115 aa13.4□□□□□ -0.26
SRGAP3-201ENST00000360413 MYMKA6NI61 221 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC9A3R1O14745 358 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM153BP0C7A2 387 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 PTENP60484 403 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM153CQ494X1 144 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ITCHQ96J02 903 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 GPAMQ9HCL2 828 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 UBQLN1Q9UMX0 589 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 AXIN1O15169 862 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 BMPR2Q13873 1038 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SWI5Q1ZZU3 235 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ACTR8Q9H981 624 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 INVSQ9Y283 1065 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MATN2O00339 956 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 LGR5O75473 907 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 FGFR2P21802 821 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MEA1Q16626 185 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 GOLGA7BQ2TAP0 167 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SNIP1Q8TAD8 396 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms