RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GLS2Q9UI32 602 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 BARX2Q9UMQ3 279 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZSCAN5CA6NGD5 496 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ANKRD65E5RJM6 399 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 HBP1O60381 514 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SEC24DO94855 1032 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SERPINA1P01009 418 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PRKCBP05771 671 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GUCA1AP43080 201 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 RAB27AP51159 221 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L6PQ6QN14 398 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FAM196AQ6ZSG2 479 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FAM120BQ96EK7 910 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 HIPK3Q9H422 1215 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CYLDQ9NQC7 956 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 RNF112Q9ULX5 631 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 LRRC42Q9Y546 428 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 JCADQ9P266 1359 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 F5H6K3 240 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SERPINB7O75635 380 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PROCP04070 461 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ATP6V1B2P21281 511 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 KLRC3Q07444 240 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GK3PQ14409 553 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CCNYL2Q5T2Q4 361 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 STXBP5Q5T5C0 1151 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 DCCP43146 1447 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SDK2Q58EX2 2172 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PI4KAP42356 2102 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 INPP4BO15327 924 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CLTBP09497 229 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CXCR2P25025 360 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CRHR1P34998 444 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MPP1Q00013 466 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 NSUN2Q08J23 767 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM74Q86UV6 250 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM73Q86UV7 250 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CPNE9Q8IYJ1 553 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 OR52L1Q8NGH7 329 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 HINFPQ9BQA5 517 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 UNKQ9C0B0 810 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FBXO44Q9H4M3 255 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PAK6Q9NQU5 681 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 E9PBE3 544 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ASMTLO95671 621 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GNL1P36915 607 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ASMTP46597 345 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FOXM1Q08050 763 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ANKS6Q68DC2 871 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PAMR1Q6UXH9 720 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 C9orf43Q8TAL5 461 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 NSUN4Q96CB9 384 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 BIRC8Q96P09 236 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TRIP12Q14669 1992 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MGAT4DA6NG13 374 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SGTAO43765 313 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 H6PDO95479 791 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CSF1RP07333 972 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SPOCD1Q6ZMY3 1216 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 HIPK1Q86Z02 1210 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SRFBP1Q8NEF9 429 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TSPEARQ8WU66 669 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 KCTD15Q96SI1 283 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TSPAN19P0C672 248 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ODC1P11926 461 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PSEN1P49768 467 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 NTRK3Q16288 839 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FBXO42Q6P3S6 717 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 COA7Q96BR5 231 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 HPDLQ96IR7 371 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SH2D3AQ9BRG2 576 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 THAP2Q9H0W7 228 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGEF33A8MVX0 844 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 GLP2RO95838 553 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PSMB9P28065 219 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 UNC93AQ86WB7 457 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PCIF1Q9H4Z3 704 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 STOX2Q9P2F5 926 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TEKT5Q96M29 485 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ALG13Q9NP73 1137 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 KCNH7Q9NS40 1196 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RNF146Q9NTX7 359 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PCSK1NQ9UHG2 260 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PFDN2Q9UHV9 154 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 INPP5FQ9Y2H2 1132 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 GNB5O14775 395 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 EDF1O60869 148 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 NR2F6P10588 404 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 DDI2Q5TDH0 399 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF571Q7Z3V5 609 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms