RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 CSKP41240 450 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 PPIDQ08752 370 aaKnown RBP24.6■■□□□ 1.53
CHKA-202ENST00000356135 CUL1Q13616 776 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 PRKD1Q15139 912 aaPredicted RBP24.6■■□□□ 1.53
CHKA-202ENST00000356135 RNF43Q68DV7 783 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 IL31Q6EBC2 164 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 LEKR1Q6ZMV7 388 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 JAMLQ86YT9 394 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 ATPAF2Q8N5M1 289 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 FIBINQ8TAL6 211 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.6■■□□□ 1.533e-25■■■■■ 51.5
CHKA-202ENST00000356135 ATP2A3Q93084 1043 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 HDAC11Q96DB2 347 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 TRIM51Q9BSJ1 452 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 TRMT61BQ9BVS5 477 aaKnown RBP24.6■■□□□ 1.53
CHKA-202ENST00000356135 CEP41Q9BYV8 373 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 MUC3BQ9H195 1237 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 ECT2Q9H8V3 914 aa24.6■■□□□ 1.53
CHKA-202ENST00000356135 UTP11Q9Y3A2 253 aaKnown RBP24.6■■□□□ 1.53
CHKA-202ENST00000356135 ESYT3A0FGR9 886 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 ILVBLA1L0T0 632 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 ARHGAP42A6NI28 874 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 KCNK1O00180 336 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 NCAM2O15394 837 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 NFATC1O95644 943 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 YBEYP58557 167 aaPredicted RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 LMAN2Q12907 356 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 PDGFRLQ15198 375 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 PARP15Q460N3 678 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 C12orf40Q86WS4 652 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 CDKL3Q8IVW4 592 aaPredicted RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 GSPT2Q8IYD1 628 aaKnown RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 APCDD1Q8J025 514 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 ALLCQ8N6M5 410 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 MAGEH1Q9H213 219 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 SEPT10Q9P0V9 454 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 IPO11Q9UI26 975 aaKnown RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 ACTL7AQ9Y615 435 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 NYNRINQ9P2P1 1898 aaKnown RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 HACD1B0YJ81 288 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 IFNB1P01574 187 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 CARSP49589 748 aaKnown RBP24.59■■□□□ 1.53
CHKA-202ENST00000356135 SERINC3Q13530 473 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 AAK1Q2M2I8 961 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 HTR3CQ8WXA8 447 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 FEM1AQ9BSK4 669 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 FUT8Q9BYC5 575 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 OR51B4Q9Y5P0 310 aa24.59■■□□□ 1.53
CHKA-202ENST00000356135 CHADO15335 359 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 ECEL1O95672 775 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 ADH1CP00326 375 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 HLA-FP30511 346 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 GAD2Q05329 585 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 RUNX3Q13761 415 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 GAB4Q2WGN9 574 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 HEATR6Q6AI08 1181 aaKnown RBP24.58■■□□□ 1.53
CHKA-202ENST00000356135 EMBQ6PCB8 327 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 CCDC13Q8IYE1 715 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 ALG14Q96F25 216 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 LMLNQ96KR4 655 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 ERP44Q9BS26 406 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 ABCB8Q9NUT2 735 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 NEU2Q9Y3R4 380 aa24.58■■□□□ 1.53
CHKA-202ENST00000356135 DUPD1Q68J44 220 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 CCDC117Q8IWD4 279 aaPredicted RBP24.57■■□□□ 1.52
CHKA-202ENST00000356135 TSGA13Q96PP4 275 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 KCNK12Q9HB15 430 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 ATP13A1Q9HD20 1204 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 KIAA1522Q9P206 1035 aaPredicted RBP24.57■■□□□ 1.52
CHKA-202ENST00000356135 SNAP91O60641 907 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 ASGR2P07307 311 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 CCNCP24863 283 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 SLC6A11P48066 632 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 VPS41P49754 854 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 PPP1R7Q15435 360 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 TAB3Q8N5C8 712 aaPredicted RBP24.57■■□□□ 1.52
CHKA-202ENST00000356135 USP33Q8TEY7 942 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 GRK7Q8WTQ7 553 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 ACE2Q9BYF1 805 aaPredicted RBP24.57■■□□□ 1.52
CHKA-202ENST00000356135 FAM114A2Q9NRY5 505 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 VPS28Q9UK41 221 aa24.57■■□□□ 1.52
CHKA-202ENST00000356135 INTS6Q9UL03 887 aaKnown RBP24.57■■□□□ 1.52
CHKA-202ENST00000356135 COL6A3P12111 3177 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 KIF26AQ9ULI4 1882 aaPredicted RBP24.56■■□□□ 1.52
CHKA-202ENST00000356135 ARNTLO00327 626 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 MAP2K7O14733 419 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 HOXC11O43248 304 aaPredicted RBP24.56■■□□□ 1.52
CHKA-202ENST00000356135 KRT14P02533 472 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 DRG2P55039 364 aaKnown RBP24.56■■□□□ 1.52
CHKA-202ENST00000356135 WASHC5Q12768 1159 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 ZBTB17Q13105 803 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 TRADDQ15628 312 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 NAIF1Q69YI7 327 aaPredicted RBP24.56■■□□□ 1.52
CHKA-202ENST00000356135 HDXQ7Z353 690 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 CCDC110Q8TBZ0 833 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 IFT81Q8WYA0 676 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 CAVIN3Q969G5 261 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 TRIM31Q9BZY9 425 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 BRD8Q9H0E9 1235 aa24.56■■□□□ 1.52
CHKA-202ENST00000356135 BRD9Q9H8M2 597 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms