RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MTSS1O43312 755 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 CKMT2P17540 419 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 RRM2P31350 389 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 HLCSP50747 726 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 TAGLNQ01995 201 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 SLC36A3Q495N2 470 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ATG14Q6ZNE5 492 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 FKBP9P1Q75LS8 142 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 PIWIL3Q7Z3Z3 882 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 CTAGE3PQ8IX95 158 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ZCCHC7Q8N3Z6 543 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 DUS3LQ96G46 650 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 ZNF717Q9BY31 904 aaPredicted RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 COPG2Q9UBF2 871 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 GAS7O60861 476 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ALDH1A2O94788 518 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 TMEM63AO94886 807 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 POLR2IP36954 125 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 B2MP61769 119 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 PSMC6P62333 389 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 MERTKQ12866 999 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 SLC10A2Q12908 348 aaPredicted RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 MTM1Q13496 603 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 COG2Q14746 738 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 EPC2Q52LR7 807 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 NXNQ6DKJ4 435 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ABRAXAS1Q6UWZ7 409 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 GALNT6Q8NCL4 622 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 RP9Q8TA86 221 aaKnown RBP16.01■□□□□ 0.15
RTN3-205ENST00000356000 SLCO4A1Q96BD0 722 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ZNF560Q96MR9 790 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 ATP13A2Q9NQ11 1180 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 GIMAP4Q9NUV9 329 aa16.01■□□□□ 0.15
RTN3-205ENST00000356000 TCRBV7S3A2A0A539 114 aa16■□□□□ 0.15
RTN3-205ENST00000356000 ERVH48-1M5A8F1 160 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MBL2P11226 248 aaPredicted RBP16■□□□□ 0.15
RTN3-205ENST00000356000 PROZP22891 400 aa16■□□□□ 0.15
RTN3-205ENST00000356000 PTGS2P35354 604 aa16■□□□□ 0.15
RTN3-205ENST00000356000 VAC14Q08AM6 782 aa16■□□□□ 0.15
RTN3-205ENST00000356000 AQP6Q13520 282 aa16■□□□□ 0.15
RTN3-205ENST00000356000 TFAP2DQ7Z6R9 452 aa16■□□□□ 0.15
RTN3-205ENST00000356000 NDUFAF2Q8N183 169 aa16■□□□□ 0.15
RTN3-205ENST00000356000 ASB9Q96DX5 294 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MBOAT7Q96N66 472 aa16■□□□□ 0.15
RTN3-205ENST00000356000 PIGSQ96S52 555 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MRPL9Q9BYD2 267 aaKnown RBP16■□□□□ 0.15
RTN3-205ENST00000356000 SYTL2Q9HCH5 934 aa16■□□□□ 0.15
RTN3-205ENST00000356000 TRIM38O00635 465 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MAN1A2O60476 641 aa16■□□□□ 0.15
RTN3-205ENST00000356000 SERPINE1P05121 402 aa16■□□□□ 0.15
RTN3-205ENST00000356000 GSTM1P09488 218 aa16■□□□□ 0.15
RTN3-205ENST00000356000 RALBP11234 206 aa16■□□□□ 0.15
RTN3-205ENST00000356000 BMP2P12643 396 aa16■□□□□ 0.15
RTN3-205ENST00000356000 GLDCP23378 1020 aa16■□□□□ 0.15
RTN3-205ENST00000356000 SLC7A1P30825 629 aa16■□□□□ 0.15
RTN3-205ENST00000356000 HADHAP40939 763 aa16■□□□□ 0.15
RTN3-205ENST00000356000 GABRB2P47870 512 aa16■□□□□ 0.15
RTN3-205ENST00000356000 NT5C2P49902 561 aa16■□□□□ 0.15
RTN3-205ENST00000356000 CYP2J2P51589 502 aa16■□□□□ 0.15
RTN3-205ENST00000356000 ADCY7P51828 1080 aa16■□□□□ 0.15
RTN3-205ENST00000356000 RFTN1Q14699 578 aaPredicted RBP16■□□□□ 0.15
RTN3-205ENST00000356000 SNX17Q15036 470 aa16■□□□□ 0.15
RTN3-205ENST00000356000 CEP55Q53EZ4 464 aa16■□□□□ 0.15
RTN3-205ENST00000356000 KCNT2Q6UVM3 1135 aa16■□□□□ 0.15
RTN3-205ENST00000356000 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
RTN3-205ENST00000356000 ADGRF2Q8IZF7 708 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MCOLN2Q8IZK6 566 aa16■□□□□ 0.15
RTN3-205ENST00000356000 PPM1NQ8N819 430 aa16■□□□□ 0.15
RTN3-205ENST00000356000 BPIFB6Q8NFQ5 453 aa16■□□□□ 0.15
RTN3-205ENST00000356000 GRPEL2Q8TAA5 225 aa16■□□□□ 0.15
RTN3-205ENST00000356000 DDX1Q92499 740 aaKnown RBP16■□□□□ 0.15
RTN3-205ENST00000356000 CNDP1Q96KN2 507 aa16■□□□□ 0.15
RTN3-205ENST00000356000 BEGAINQ9BUH8 593 aa16■□□□□ 0.15
RTN3-205ENST00000356000 MKRN2Q9H000 416 aaKnown RBP16■□□□□ 0.15
RTN3-205ENST00000356000 FBXO8Q9NRD0 319 aa16■□□□□ 0.15
RTN3-205ENST00000356000 DGKBQ9Y6T7 804 aa16■□□□□ 0.15
RTN3-205ENST00000356000 C9IYK1 514 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 STX16-NPEPL1H3BU86 382 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SHOXO15266 292 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 PHGDHO43175 533 aaKnown RBP15.99■□□□□ 0.15
RTN3-205ENST00000356000 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 KCNK2O95069 426 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 ENO3P13929 434 aaPredicted RBP15.99■□□□□ 0.15
RTN3-205ENST00000356000 CCND2P30279 289 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SERPINB5P36952 375 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 TNNI2P48788 182 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 CLCNKBP51801 687 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 CETN1Q12798 172 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 CATSPER3Q86XQ3 398 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 TGFBRAP1Q8WUH2 860 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 RCN3Q96D15 328 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 HDAC11Q96DB2 347 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SLITRK1Q96PX8 696 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms