RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 HNRNPLP14866 589 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 PRKCHP24723 683 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 CDKN2BP42772 138 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 PAPOLAP51003 745 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 DYNLT1P63172 113 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 ADCY2Q08462 1091 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF211Q13398 564 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 ARHGAP36Q6ZRI8 547 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 RFX6Q8HWS3 928 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 RCOR2Q8IZ40 523 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 DCAF4L2Q8NA75 395 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 EXD1Q8NHP7 514 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 MYO19Q96H55 970 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 HES6Q96HZ4 224 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 C2orf49Q9BVC5 232 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 HEMGNQ9BXL5 484 aa18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 ACE2Q9BYF1 805 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 MYO18AQ92614 2054 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-202ENST00000355841 TTC34A8MYJ7 566 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 MFSD11O43934 449 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 PYGMP11217 842 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 NTSR1P30989 418 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 NDST2P52849 883 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 RWDD2BP57060 319 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 ARF5P84085 180 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 SATB1Q01826 763 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 GBE1Q04446 702 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 SERINC3Q13530 473 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 AFMIDQ63HM1 303 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 TMEM92Q6UXU6 159 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 SPEM1Q8N4L4 309 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 LRRN4Q8WUT4 740 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 MAK16Q9BXY0 300 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 CHURC1-FNTBB4DL54 471 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 ASLP04424 464 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 YBEYP58557 167 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 SULT2A1Q06520 285 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 PARP15Q460N3 678 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 MEI1Q5TIA1 1274 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 KIAA1211LQ6NV74 962 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 NPNTQ6UXI9 565 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 UBL4BQ8N7F7 174 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 PLD5Q8N7P1 536 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 DTWD2Q8NBA8 298 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 KCNV2Q8TDN2 545 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 HERPUD2Q9BSE4 406 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 TMEM245Q9H330 911 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 DONSONQ9NYP3 566 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 MMP17Q9ULZ9 603 aa18.28■□□□□ 0.52
PDLIM7-202ENST00000355841 MIF4GDA9UHW6 222 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 J3KR12 359 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 SMAD6O43541 496 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 KDELR3O43731 214 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 HOXB2P14652 356 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 VAV1P15498 845 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 COL9A1P20849 921 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ETFBP38117 255 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 SLC10A2Q12908 348 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 TAZQ16635 292 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 TFDP3Q5H9I0 405 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ZNF569Q5MCW4 686 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 TSSK4Q6SA08 328 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 ACDQ96AP0 544 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 RBM41Q96IZ5 413 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 SAE1Q9UBE0 346 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 SLC25A13Q9UJS0 675 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 HPCAL4Q9UM19 191 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.52
PDLIM7-202ENST00000355841 NUP205Q92621 2012 aa18.27■□□□□ 0.51
PDLIM7-202ENST00000355841 hCG_1818297A0A087WSY0 165 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 A0A1W2PQF6 199 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 ARHGAP42A6NI28 874 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 ENC1O14682 589 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 CST8O60676 142 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 ATG13O75143 517 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 CD160O95971 181 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 EPHX1P07099 455 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 MAGEA9P43362 315 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 ENPP2Q13822 863 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 PAFAH1B3Q15102 231 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 SLC9A4Q6AI14 798 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 SDE2Q6IQ49 451 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 SYT13Q7L8C5 426 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 TRMT11Q7Z4G4 463 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 VSIG1Q86XK7 387 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 LZTR1Q8N653 840 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 HHIPQ96QV1 700 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 GABRG3Q99928 467 aa18.26■□□□□ 0.51
PDLIM7-202ENST00000355841 ZNF487B1APH4 448 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 APOL1O14791 398 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SRPRAP08240 638 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms