RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZNF821O75541 412 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 ZMPSTE24O75844 475 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 CD160O95971 181 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 IL1BP01584 269 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 SYPP08247 313 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 GNSP15586 552 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 CDK11BP21127 795 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 ADPRHP54922 357 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 SHC2P98077 582 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 IQCB1Q15051 598 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 HLA-BQ31612 363 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 WDR59Q6PJI9 974 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 ARCQ7LC44 396 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 RABEPKQ7Z6M1 372 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 CHST14Q8NCH0 376 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 GANCQ8TET4 914 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 VOPP1Q96AW1 172 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 C1orf74Q96LT6 269 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 AGPAT1Q99943 283 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 TMEM121BQ9BXQ6 578 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 MUC3BQ9H195 1237 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 PCED1AQ9H1Q7 454 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 GAREM1Q9H706 876 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 BTBD3Q9Y2F9 522 aa17.16■□□□□ 0.34
PDLIM7-201ENST00000355572 BNIP3LO60238 219 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 F9P00740 461 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 CD27P26842 260 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 GSCP56915 257 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 RPL7AP62424 266 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 ARF5P84085 180 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 OGDHQ02218 1023 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 SULT2A1Q06520 285 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 ELAVL3Q14576 367 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 ACCSLQ4AC99 568 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 PHF13Q86YI8 300 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 PYROXD2Q8N2H3 581 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 ARRDC3Q96B67 414 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 HAPLN3Q96S86 360 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 SLC25A13Q9UJS0 675 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 ANGPTL2Q9UKU9 493 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 PPM1HQ9ULR3 514 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
PDLIM7-201ENST00000355572 LRRK1Q38SD2 2015 aa17.14■□□□□ 0.34
PDLIM7-201ENST00000355572 CCP110O43303 1012 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 HYAL3O43820 417 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 CBFA2T3O75081 653 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 TPM2P07951 284 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 C5AR1P21730 350 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 ADRA1BP35368 520 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 ACVRL1P37023 503 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 PTPN9P43378 593 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 TAS2R38P59533 333 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 SIM1P81133 766 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 CNTN1Q12860 1018 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 PPP1R15BQ5SWA1 713 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 PRAMEF14Q5SWL7 426 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 AGBL4Q5VU57 503 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 TRIM72Q6ZMU5 477 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 NLRP14Q86W24 1093 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 NAXDQ8IW45 347 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 DRC7Q8IY82 874 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 OR2A12Q8NGT7 310 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 PIP4K2CQ8TBX8 421 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 OMDQ99983 421 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 TNKS2Q9H2K2 1166 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 FZD4Q9ULV1 537 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 SCML1Q9UN30 329 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 ANKRD6Q9Y2G4 727 aa17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 TDRD6O60522 2096 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-201ENST00000355572 ANKRD36A6QL64 1941 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 ACACBO00763 2458 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 A0A1W2PPC4 97 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 A0A1W2PR77 199 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 C1QTNF9BB2RNN3 333 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 H0Y8X5 98 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 ADH1BP00325 375 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 C1QTNF9P0C862 333 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 GOT1P17174 413 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 IL9RQ01113 521 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 SHBQ15464 509 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 SETD3Q86TU7 594 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 DCAF4L2Q8NA75 395 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 MSANTD4Q8NCY6 345 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 OR2T34Q8NGX1 318 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 OR14C36Q8NHC7 312 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 BAHD1Q8TBE0 780 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 FAM172AQ8WUF8 416 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 ZYG11BQ9C0D3 744 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 OSGEPQ9NPF4 335 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 TM7SF3Q9NS93 570 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 SEPT11Q9NVA2 429 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms