RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 LGR5O75473 907 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 UNGP13051 313 aaPredicted RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PTPN7P35236 360 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 GLUD2P49448 558 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 TBX4P57082 545 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RTP1P59025 263 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SGCGQ13326 291 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 GSTCDQ8NEC7 633 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 BHLHE22Q8NFJ8 381 aaPredicted RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 SEMA6AQ9H2E6 1030 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 TRIM45Q9H8W5 580 aaPredicted RBP12.54□□□□□ -0.4
COLCA1-201ENST00000355430 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 MAN1C1Q9NR34 630 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
COLCA1-201ENST00000355430 PCDH8O95206 1070 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 COX4I1P13073 169 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 KHDC1Q4VXA5 237 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ZDHHC17Q8IUH5 632 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ADAM32Q8TC27 787 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 TUBGCP3Q96CW5 907 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 SORCS3Q9UPU3 1222 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 MYH10P35580 1976 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CD48P09326 243 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CCR1P32246 355 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 IFNA8P32881 189 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CHN2P52757 468 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 RIPOR3Q96MK2 946 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CADM1Q9BY67 442 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 HEATR9A2RTY3 570 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 UBDO15205 165 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CST3P01034 146 aaPredicted RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 HMOX2P30519 316 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CDK7P50613 346 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 NAB1Q13506 487 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ARCQ7LC44 396 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 OR52K1Q8NGK4 314 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 FAM136AQ96C01 138 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CEP19Q96LK0 163 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 C11orf84Q9BUA3 381 aaPredicted RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 NFKBIZQ9BYH8 718 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CRLS1Q9UJA2 301 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ALDH1A2O94788 518 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ME2P23368 584 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 PDK3Q15120 406 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 FNDC3BQ53EP0 1204 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 KIAA0319LQ8IZA0 1049 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 B4GALNT2Q8NHY0 566 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 SUSD6Q92537 303 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 APOBEC3GQ9HC16 384 aaKnown RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 SCUBE2Q9NQ36 999 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
COLCA1-201ENST00000355430 AKAP7Q9P0M2 348 aaPredicted RBP12.53□□□□□ -0.4
COLCA1-201ENST00000355430 A0A0A0MRY4 1105 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 BIRC5O15392 142 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 PHGDHO43175 533 aaKnown RBP12.52□□□□□ -0.4
COLCA1-201ENST00000355430 B4GALT5O43286 388 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 PIGNO95427 931 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 CEP68Q76N32 757 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 C10orf107Q8IVU9 208 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.4
COLCA1-201ENST00000355430 PPP1R13LQ8WUF5 828 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 C10orf82Q8WW14 230 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 SPATA13Q96N96 652 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 GPR20Q99678 358 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 C1QTNF7Q9BXJ2 289 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 ETAA1Q9NY74 926 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 PLLPQ9Y342 182 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 TBC1D4O60343 1298 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 PGM3O95394 542 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 NUMBP49757 651 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 RENBPP51606 427 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 GDF10P55107 478 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 GSTA3Q16772 222 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 CYP2R1Q6VVX0 501 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 RGL4Q8IZJ4 473 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 NETO2Q8NC67 525 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.4
COLCA1-201ENST00000355430 APOL5Q9BWW9 433 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms