RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 GOT1P17174 413 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 CNTFP26441 200 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SULT1E1P49888 294 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SERPINB9P50453 376 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ZNF135P52742 658 aaPredicted RBP11.33□□□□□ -0.6
SNU13-202ENST00000355257 PTPN5P54829 565 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ADIGQ0VDE8 80 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNU13-202ENST00000355257 DPYSQ14117 519 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 PDK1Q15118 436 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
SNU13-202ENST00000355257 ANKRD20A2Q5SQ80 823 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ANKRD20A1Q5TYW2 823 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ANKRD20A3Q5VUR7 823 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 WSCD1Q658N2 575 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 LRRC8BQ6P9F7 803 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ZNF449Q6P9G9 518 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 CCDC149Q6ZUS6 474 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SCML4Q8N228 414 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 TMEM105Q8N8V8 129 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 TMEM237Q96Q45 408 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 PRRX2Q99811 253 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 TXLNGQ9NUQ3 528 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 RRN3Q9NYV6 651 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 FNIP2Q9P278 1114 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 IGSF9Q9P2J2 1179 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 SLC17A7Q9P2U7 560 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 ADAM28Q9UKQ2 775 aa11.33□□□□□ -0.6
SNU13-202ENST00000355257 CXorf49A8MYA2 514 aaPredicted RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 TRAFD1O14545 582 aaPredicted RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 RFPL1O75677 317 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 RFPL2O75678 378 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 KRT38O76015 456 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 BEST1O76090 585 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 GLUD1P00367 558 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 FYNP06241 537 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 TROVE2P10155 538 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNU13-202ENST00000355257 PAX3P23760 479 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 RPL9P32969 192 aaKnown RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 SEMA3BQ13214 749 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 TUSC3Q13454 348 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 NAB1Q13506 487 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 DBN1Q16643 649 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 INTS6LQ5JSJ4 861 aaKnown RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 FAXCQ5TGI0 409 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 FYB2Q5VWT5 728 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 PPM1NQ8N819 430 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 RNF139Q8WU17 664 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 INPP5DQ92835 1189 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 TTC17Q96AE7 1141 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 KLHL29Q96CT2 875 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 CFAP36Q96G28 342 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 OXNAD1Q96HP4 312 aaPredicted RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 LRRC37BQ96QE4 947 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 NAT9Q9BTE0 207 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 MAGEB5Q9BZ81 275 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 BRD8Q9H0E9 1235 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 WDR6Q9NNW5 1121 aaKnown RBP11.32□□□□□ -0.6
SNU13-202ENST00000355257 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 SMYD2Q9NRG4 433 aa11.32□□□□□ -0.6
SNU13-202ENST00000355257 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 TRIM49D1C9J1S8 452 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 PPP1R12AO14974 1030 aaPredicted RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 DCLK1O15075 740 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 TGM5O43548 720 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 PIAS1O75925 651 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 STK10O94804 968 aaKnown RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 ATP6V1G2O95670 118 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 PYGBP11216 843 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 SLC8A1P32418 973 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 ADRA1BP35368 520 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 DAOAP59103 153 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 KCNJ2P63252 427 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 CDK18Q07002 472 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 MTM1Q13496 603 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 FRG1Q14331 258 aaKnown RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 USP41Q3LFD5 358 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 DCAF6Q58WW2 860 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 CD300LGQ6UXG3 332 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 SPATA31D4Q6ZUB0 917 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 MARK2Q7KZI7 788 aaKnown RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 OTOP3Q7RTS5 596 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 TBC1D1Q86TI0 1168 aaPredicted RBP11.31□□□□□ -0.6
SNU13-202ENST00000355257 FAM131BQ86XD5 332 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 TRIM42Q8IWZ5 723 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 PYROXD2Q8N2H3 581 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 RAB3IL1Q8TBN0 382 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
SNU13-202ENST00000355257 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms