RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PTPN11Q06124 597 aaPredicted RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 LAMTOR4Q0VGL1 99 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 TMPRSS6Q8IU80 811 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 SERPINB11Q96P15 392 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 CRAMP1Q96RY5 1269 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF780BQ9Y6R6 833 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 MICAL2O94851 1124 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 RASA1P20936 1047 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 PARGQ86W56 976 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 CXorf40BQ96DE9 158 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 CDC42EP4Q9H3Q1 356 aaKnown RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF214Q9UL59 606 aaPredicted RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 SERPINE1P05121 402 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 TPH1P17752 444 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 IDH2P48735 452 aaKnown RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 TSHZ1Q6ZSZ6 1077 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 MNTQ99583 582 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 TNKS2Q9H2K2 1166 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 CATSPERZQ9NTU4 200 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 GNPTGQ9UJJ9 305 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 RPS6KA6Q9UK32 745 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 RWDD3Q9Y3V2 267 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 IRAK3Q9Y616 596 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A087X1B8 175 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 C15orf38-AP3S2A0A0A6YYH1 394 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 NTRK1P04629 796 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 RAET1GQ6H3X3 334 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 ARPINQ7Z6K5 226 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 SELENOMQ8WWX9 145 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 ZFYVE16Q7Z3T8 1539 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 H3BNH8 94 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 H2AFXP16104 143 aaPredicted RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 RPS12P25398 132 aaKnown RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 PTPN4P29074 926 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 KAT5Q92993 513 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 POP1Q99575 1024 aaKnown RBP5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 MROH8Q9H579 483 aa5.87□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A0X1KG70 313 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 USP17L7P0C7H9 530 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ADSLP30566 484 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TOP3AQ13472 1001 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SLC45A4Q5BKX6 768 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 EFCAB3Q8N7B9 438 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZFP28Q8NHY6 868 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ASB2Q96Q27 587 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SYNMO15061 1565 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ABHD14A-ACY1A0A1B0GW23 586 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FOXN3O00409 490 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 PSIP1O75475 530 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ATP5F1P24539 256 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 BMPR2Q13873 1038 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 BTG3Q14201 252 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 GRIN3AQ8TCU5 1115 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 EPB41L1Q9H4G0 881 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TFR2Q9UP52 801 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TNPO3Q9Y5L0 923 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 GPC6Q9Y625 555 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RRM1P23921 792 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 KIAA1324Q6UXG2 1013 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CYP2R1Q6VVX0 501 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MAGEE2Q8TD90 523 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 PRCCQ92733 491 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MYLPFQ96A32 169 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MAML3Q96JK9 1138 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 PSMD13Q9UNM6 376 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ERGIC3Q9Y282 383 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 EFR3BQ9Y2G0 817 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CDC42BPGQ6DT37 1551 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SLC26A2P50443 739 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RAB25P57735 213 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CDC42P60953 191 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FOXO4P98177 505 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF276Q8N554 614 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MSRAQ9UJ68 235 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MGAT4AQ9UM21 535 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SMIM11AP58511 58 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TAS2R41P59536 307 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 AP3S1Q92572 193 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SLC9A6Q92581 669 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SMARCD1Q96GM5 515 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 KLF15Q9UIH9 416 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 IKZF3Q9UKT9 509 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FAM205CA6NFA0 338 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MYBL2P10244 700 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 IGFALSP35858 605 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RAPSNQ13702 412 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FBXO30Q8TB52 745 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZDHHC6Q9H6R6 413 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TRHDEQ9UKU6 1024 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 AKT2P31751 481 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ARF3P61204 181 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ARF1P84077 181 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SPIRE1Q08AE8 756 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CDH17Q12864 832 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCNG2Q16589 344 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RAD9BQ6WBX8 426 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 LGI2Q8N0V4 545 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 NOA1Q8NC60 698 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCDC54Q8NEL0 328 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms