RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LYPLA1O75608 230 aaPredicted RBP22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 ALOX15P16050 662 aaPredicted RBP22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 CD52P31358 61 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 THPOP40225 353 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 BRCC3P46736 316 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 PDPK2PQ6A1A2 396 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 OVOS1Q6IE37 1185 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 RWDD4Q6NW29 188 aaKnown RBP22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 CMC1Q7Z7K0 106 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 RSPH1Q8WYR4 309 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 ZNF778Q96MU6 729 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 SORT1Q99523 831 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 CATSPERBQ9H7T0 1116 aa22.69■■□□□ 1.22
NKX2-1-201ENST00000354822 F8W8V4 182 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 H0Y3Z8 333 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 SEPT4O43236 478 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 ANXA9O76027 345 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 FLT3LGP49771 235 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 CLNS1AP54105 237 aaKnown RBP22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 RCN2Q14257 317 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 DSC3Q14574 896 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 KPNB1Q14974 876 aaKnown RBP22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 TAF11Q15544 211 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 CLEC14AQ86T13 490 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 RBM15BQ8NDT2 890 aaKnown RBP22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 KCNV2Q8TDN2 545 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 STMN2Q93045 179 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 ZIC5Q96T25 663 aa22.68■■□□□ 1.22
NKX2-1-201ENST00000354822 IRAK2O43187 625 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 LUC7L3O95232 432 aaKnown RBP22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 APOA4P06727 396 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 PTDSS1P48651 473 aaKnown RBP22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 KDSRQ06136 332 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 TUBB3Q13509 450 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CMPK2Q5EBM0 449 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 ACSBG2Q5FVE4 666 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 C6orf163Q5TEZ5 329 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 BTBD8Q5XKL5 378 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CD300LGQ6UXG3 332 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 LCA5Q86VQ0 697 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CELF6Q96J87 481 aaKnown RBP22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 FCRL5Q96RD9 977 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 MCMBPQ9BTE3 642 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 TMLHEQ9NVH6 421 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 ANKRD6Q9Y2G4 727 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CDY1Q9Y6F8 540 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 PRR5-ARHGAP8B1AHC4 643 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 TMEM114B3SHH9 223 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 TYMPP19971 482 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 HOXC13P31276 330 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CCR1P32246 355 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CPA2P48052 419 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 ARHGAP8P85298 464 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 ITGA9Q13797 1035 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CCDC6Q16204 474 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 PCID2Q5JVF3 399 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 ATPAF2Q8N5M1 289 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CNTD1Q8N815 330 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 NAF1Q96HR8 494 aaKnown RBP22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 SIK2Q9H0K1 926 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 CXorf56Q9H5V9 222 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 IARS2Q9NSE4 1012 aaKnown RBP22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 PCDHB12Q9Y5F1 795 aa22.67■■□□□ 1.22
NKX2-1-201ENST00000354822 MGEA5O60502 916 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 TM7SF2O76062 418 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 C2P06681 752 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 SMAD1Q15797 465 aaKnown RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 PAN2Q504Q3 1202 aaKnown RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 NET1Q7Z628 596 aaPredicted RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 LRRTM3Q86VH5 581 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 CCDC117Q8IWD4 279 aaPredicted RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 SCUBE1Q8IWY4 988 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 SUSD3Q96L08 255 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 APOL2Q9BQE5 337 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 ABT1Q9ULW3 272 aaKnown RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 NUP205Q92621 2012 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 DFFAO00273 331 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 PSMG1O95456 288 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 TPH1P17752 444 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 DNAJB1P25685 340 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 IDH3AP50213 366 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 ANO4Q32M45 955 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 RABGAP1LQ5R372 815 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 SPATA2LQ8IUW3 424 aaPredicted RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 LRRC49Q8IUZ0 686 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 PLD6Q8N2A8 252 aaKnown RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 OR10T2Q8NGX3 314 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 ATXN7L3BQ96GX2 97 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 VPS39Q96JC1 886 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 SMOC2Q9H3U7 446 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 NMRAL1Q9HBL8 299 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 GEMIN8Q9NWZ8 242 aaKnown RBP22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 PLA2G4CQ9UP65 541 aa22.66■■□□□ 1.22
NKX2-1-201ENST00000354822 MATN3O15232 486 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 ADAMTS4O75173 837 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 CIB2O75838 187 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 NMBRP28336 390 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 POLD2P49005 469 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PPP2R5DQ14738 602 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 UGP2Q16851 508 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms