RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 TTC17Q96AE7 1141 aa24.78■■□□□ 1.56
HMGA2-201ENST00000354636 TSGA13Q96PP4 275 aa24.78■■□□□ 1.56
HMGA2-201ENST00000354636 C2orf49Q9BVC5 232 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-201ENST00000354636 AP1M1Q9BXS5 423 aa24.78■■□□□ 1.56
HMGA2-201ENST00000354636 IPO11Q9UI26 975 aaKnown RBP24.78■■□□□ 1.56
HMGA2-201ENST00000354636 HPCAL4Q9UM19 191 aa24.78■■□□□ 1.56
HMGA2-201ENST00000354636 MRFAP1Q9Y605 127 aa24.78■■□□□ 1.56
HMGA2-201ENST00000354636 TBC1D3BA6NDS4 549 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 PPP1R12AO14974 1030 aaPredicted RBP24.77■■□□□ 1.56
HMGA2-201ENST00000354636 APODP05090 189 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 EIF3EP60228 445 aaKnown RBP24.77■■□□□ 1.56
HMGA2-201ENST00000354636 PRKCQQ04759 706 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 ZNF33AQ06730 810 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 PPIDQ08752 370 aaKnown RBP24.77■■□□□ 1.56
HMGA2-201ENST00000354636 CCNG2Q16589 344 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 TMEM196Q5HYL7 178 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 DNTTIP2Q5QJE6 756 aaKnown RBP24.77■■□□□ 1.56
HMGA2-201ENST00000354636 ZC3H18Q86VM9 953 aaKnown RBP24.77■■□□□ 1.56
HMGA2-201ENST00000354636 SFTPA1Q8IWL2 248 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 C1orf54Q8WWF1 131 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 ATG4AQ8WYN0 398 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 LGMNQ99538 433 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 BRD8Q9H0E9 1235 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 ARHGEF3Q9NR81 526 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 VPS51Q9UID3 782 aa24.77■■□□□ 1.56
HMGA2-201ENST00000354636 J3KR12 359 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 CBX4O00257 560 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 KRIT1O00522 736 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 MCF2LO15068 1137 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 SNAP91O60641 907 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 PRAMEF11O60813 436 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 RBP3P10745 1247 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 POLR2EP19388 210 aaKnown RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 CCNCP24863 283 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 ARF5P84085 180 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 IL10RBQ08334 325 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 EIF4HQ15056 248 aaKnown RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 PON2Q15165 354 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 NUDT18Q6ZVK8 323 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 CCNYQ8ND76 341 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 LRRN4Q8WUT4 740 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 FAM3CQ92520 227 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 PDFQ9HBH1 243 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 HOMER3Q9NSC5 361 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 ELOVL2Q9NXB9 296 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 DNPEPQ9ULA0 475 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 HACD1B0YJ81 288 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 MAN2B1O00754 1011 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 TIMM44O43615 452 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 LIASO43766 372 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 SULT2A1Q06520 285 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 PRKD1Q15139 912 aaPredicted RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 CYP1B1Q16678 543 aa24.76■■□□□ 1.55
HMGA2-201ENST00000354636 DRICH1Q6PGQ1 229 aaPredicted RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 TFB1MQ8WVM0 346 aaKnown RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 EZH1Q92800 747 aaPredicted RBP24.76■■□□□ 1.55
HMGA2-201ENST00000354636 CXorf51AA0A1B0GTR3 108 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 KRBA1A5PL33 1030 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 CD72P21854 359 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 WHAMMP3Q1A5X7 153 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 SLC45A4Q5BKX6 768 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 FSTL4Q6MZW2 842 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 TIGD7Q6NT04 549 aaPredicted RBP24.75■■□□□ 1.55
HMGA2-201ENST00000354636 B4GALNT4Q76KP1 1039 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 SIX5Q8N196 739 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 FATE1Q969F0 183 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 NKD2Q969F2 451 aaPredicted RBP24.75■■□□□ 1.55
HMGA2-201ENST00000354636 CIPCQ9C0C6 399 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 SP110Q9HB58 689 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 STARD13Q9Y3M8 1113 aa24.75■■□□□ 1.55
HMGA2-201ENST00000354636 ZSCAN5CA6NGD5 496 aaPredicted RBP24.74■■□□□ 1.55
HMGA2-201ENST00000354636 H7C0C1 242 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 K7EQS6 105 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 CD160O95971 181 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 PEX11BO96011 259 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 ASLP04424 464 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 ATP5BP06576 529 aaKnown RBP24.74■■□□□ 1.55
HMGA2-201ENST00000354636 DRD1P21728 446 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 CTSOP43234 321 aaPredicted RBP24.74■■□□□ 1.55
HMGA2-201ENST00000354636 TNFRSF4P43489 277 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 ATP5OP48047 213 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 ECT2LQ008S8 904 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 AP1B1Q10567 949 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 GRSF1Q12849 480 aaKnown RBP eCLIP24.74■■□□□ 1.55
HMGA2-201ENST00000354636 OASLQ15646 514 aaKnown RBP24.74■■□□□ 1.55
HMGA2-201ENST00000354636 RETSATQ6NUM9 610 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 ZNF852Q6ZMS4 543 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 CCDC13Q8IYE1 715 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 SHDQ96IW2 340 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 QKIQ96PU8 341 aaKnown RBP eCLIP24.74■■□□□ 1.554e-7■■■■□ 22.5
HMGA2-201ENST00000354636 F5P12259 2224 aa24.74■■□□□ 1.55
HMGA2-201ENST00000354636 GOLGA6L10A0A0M3HER8 536 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 BCLAF3A2AJT9 711 aaKnown RBP24.73■■□□□ 1.55
HMGA2-201ENST00000354636 MATN3O15232 486 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 DLDP09622 509 aaKnown RBP24.73■■□□□ 1.55
HMGA2-201ENST00000354636 STARD6P59095 220 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 ZXDAP98168 799 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 SLC20A2Q08357 652 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 SNX1Q13596 522 aa24.73■■□□□ 1.55
HMGA2-201ENST00000354636 BYSLQ13895 437 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms