RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 POPDC3Q9HBV1 291 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 WDR6Q9NNW5 1121 aaKnown RBP3.8□□□□□ -1.8
RNF38-203ENST00000353739 PFDN4Q9NQP4 134 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 SNX15Q9NRS6 342 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 PIGVQ9NUD9 493 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 COX16Q9P0S2 106 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 COPG2Q9UBF2 871 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 DCTN4Q9UJW0 460 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 GJD2Q9UKL4 321 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 RIMKLBQ9ULI2 386 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 MAGED2Q9UNF1 606 aaPredicted RBP3.8□□□□□ -1.8
RNF38-203ENST00000353739 VPS9D1Q9Y2B5 631 aa3.8□□□□□ -1.8
RNF38-203ENST00000353739 FRMPD3Q5JV73 1810 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CA12O43570 354 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PARNO95453 639 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 RBP1P09455 135 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RHOQP17081 205 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 SERPINB3P29508 390 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ELF1P32519 619 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RENBPP51606 427 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 COPAP53621 1224 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 AQP5P55064 265 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 DNAJB13P59910 316 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RPL10AP62906 217 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 BEX3Q00994 111 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CDC16Q13042 620 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 MSLNQ13421 630 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 TAF11Q15544 211 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PARP15Q460N3 678 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ANKRD20A4Q4UJ75 823 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TEDDM1Q5T9Z0 273 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 LIPMQ5VYY2 423 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 KCTD11Q693B1 232 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ZNF280DQ6N043 979 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RWDD4Q6NW29 188 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 RAPH1Q70E73 1250 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RAB44Q7Z6P3 723 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 MON1AQ86VX9 555 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 NUP93Q8N1F7 819 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ZNF276Q8N554 614 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 DQX1Q8TE96 717 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 SPATA17Q96L03 361 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 LGMNQ99538 433 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PTPN18Q99952 460 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CCDC106Q9BWC9 280 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ILKAPQ9H0C8 392 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 GLOD4Q9HC38 313 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TLR8Q9NR97 1041 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 IL1RAPL1Q9NZN1 696 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 FLRT1Q9NZU1 646 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 CDYLQ9Y232 598 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RAP2CQ9Y3L5 183 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TLL2Q9Y6L7 1015 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CASP8AP2Q9UKL3 1982 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 DYTNA2CJ06 578 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CXorf49A8MYA2 514 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 DFFAO00273 331 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TRIM13O60858 407 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ANP32DO95626 131 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 THRAP10827 490 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 NFKB1P19838 968 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TM4SF4P48230 202 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PRMT2P55345 433 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 MRPS35P82673 323 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 SLC34A1Q06495 639 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 BMPR2Q13873 1038 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PDE1CQ14123 709 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 PRAMEF19Q5SWL8 479 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 BSPRYQ5W0U4 402 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 AFMIDQ63HM1 303 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 GDF6Q6KF10 455 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 PAQR9Q6ZVX9 377 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 EFL1Q7Z2Z2 1120 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 TAC4Q86UU9 113 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TMEM126BQ8IUX1 230 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ARID3BQ8IVW6 561 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 SCUBE1Q8IWY4 988 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 AGAP11Q8TF27 550 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TMEM40Q8WWA1 233 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 VPS39Q96JC1 886 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CNDP1Q96KN2 507 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 GAD1Q99259 594 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 KLF6Q99612 283 aaPredicted RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 IL12RB2Q99665 862 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 GPR22Q99680 433 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RTKNQ9BST9 563 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 ZYG11BQ9C0D3 744 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 SP110Q9HB58 689 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 RRAGCQ9HB90 399 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 SLCO1B3Q9NPD5 702 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CLIC5Q9NZA1 410 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 STK39Q9UEW8 545 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 MAFFQ9ULX9 164 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PRPF19Q9UMS4 504 aaKnown RBP3.79□□□□□ -1.8
RNF38-203ENST00000353739 DNAJC16Q9Y2G8 782 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 TCAF1Q9Y4C2 921 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 PLXNA3P51805 1871 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CCDC195A0A1B0GUA6 201 aa3.79□□□□□ -1.8
RNF38-203ENST00000353739 CLDN5O00501 218 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms