RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 WNT7AO00755 349 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 AVILO75366 819 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RFPL2O75678 378 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PTTG1O95997 202 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TFPTP0C1Z6 253 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 UMPSP11172 480 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PHKA1P46020 1223 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CTSWP56202 376 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 DSTNP60981 165 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RPL10AP62906 217 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 MYBPC1Q00872 1141 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MAB21L1Q13394 359 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 INO80DQ53TQ3 878 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 LCN1P1Q5VSP4 162 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RNF135Q8IUD6 432 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PRELID2Q8N945 189 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CHPT1Q8WUD6 406 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FBXL8Q96CD0 374 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CENPNQ96H22 339 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 PANX3Q96QZ0 392 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NODALQ96S42 347 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 HSD3B7Q9H2F3 369 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RUVBL2Q9Y230 463 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 MTF2Q9Y483 593 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 PCDHA1Q9Y5I3 950 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 DEPDC5O75140 1603 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 OR6C70A6NIJ9 312 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SDR42E2A6NKP2 422 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 KCNK1O00180 336 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MYL3P08590 195 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PSKH1P11801 424 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NPR2P20594 1047 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 HTR2BP41595 481 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CSNK2BP67870 215 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 XKR9Q5GH70 373 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FAXCQ5TGI0 409 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 AGAP9Q5VTM2 703 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 UGT3A1Q6NUS8 523 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC30A10Q6XR72 485 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 DSELQ8IZU8 1212 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ATG16L2Q8NAA4 619 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 OR2T34Q8NGX1 318 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 OR2T3Q8NH03 318 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ITFG1Q8TB96 612 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MSANTD3Q96H12 275 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SEPHS2Q99611 448 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CIB1Q99828 191 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC52A2Q9HAB3 445 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NR5A2O00482 541 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TMEM127O75204 238 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NDUFS2O75306 463 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PSAPP07602 524 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 M6PRP20645 277 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ATP6V0D1P61421 351 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 MPP1Q00013 466 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PICALMQ13492 652 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 DNASE1L3Q13609 305 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 UTS2BQ765I0 119 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ZNF276Q8N554 614 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CAMKK1Q8N5S9 505 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FAM71DQ8N9W8 422 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CENPIQ92674 756 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 NEUROD4Q9HD90 331 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SLC35C2Q9NQQ7 365 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 HMGXB4Q9UGU5 601 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PCDHA6Q9UN73 950 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PCDHA8Q9Y5H6 950 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RAD54BQ9Y620 910 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MYO7AQ13402 2215 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PNMA6FA0A0J9YX94 578 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 KRBA1A5PL33 1030 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 H3BMM5 538 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 OR6B1O95007 311 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RORAP35398 523 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MTX3Q5HYI7 312 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TXNDC11Q6PKC3 985 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 PTF1AQ7RTS3 328 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ZNF605Q86T29 641 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CNTD1Q8N815 330 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 FEZF2Q8TBJ5 459 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 TEX47Q8TBZ9 253 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 EXT2Q93063 718 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 MYLPFQ96A32 169 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RNFT2Q96EX2 444 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ATXN7L3BQ96GX2 97 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 C2orf49Q9BVC5 232 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 FSD1LQ9BXM9 530 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 RDH8Q9NYR8 311 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ZNF624Q9P2J8 865 aaPredicted RBP5.11□□□□□ -1.59
SKP1-202ENST00000353411 ANKMY1Q9P2S6 941 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SF3B1O75533 1304 aaKnown RBP eCLIP5.11□□□□□ -1.591e-6■■■■■ 64.6
SKP1-202ENST00000353411 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 K7ERI5 159 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 CST8O60676 142 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 ICMTO60725 284 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 NR3C2P08235 984 aa5.11□□□□□ -1.59
SKP1-202ENST00000353411 SNRPB2P08579 225 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms