RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 OSTM1Q86WC4 334 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 SNX32Q86XE0 403 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 RNF169Q8NCN4 708 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 B3GALNT2Q8NCR0 500 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 STON2Q8WXE9 905 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 TNIP3Q96KP6 325 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 DNAI2Q9GZS0 605 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 DRC3Q9H069 523 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 ZNF385DQ9H6B1 395 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 PLXNB2O15031 1838 aa25■■□□□ 1.59
CPNE1-202ENST00000352393 GOLGA8QA0A0J9YX86 632 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 GOLGA8OA6NCC3 632 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 GOLGA8NF8WBI6 632 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 HDAC3O15379 428 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 ADCYAP1R1P41586 468 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 TMEM62Q0P6H9 643 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 ITGA7Q13683 1181 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 CERCAMQ5T4B2 595 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 C1QTNF1Q9BXJ1 281 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 ACE2Q9BYF1 805 aaPredicted RBP24.99■■□□□ 1.59
CPNE1-202ENST00000352393 WDR55Q9H6Y2 383 aaPredicted RBP24.99■■□□□ 1.59
CPNE1-202ENST00000352393 VPS28Q9UK41 221 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 GINS2Q9Y248 185 aa24.99■■□□□ 1.59
CPNE1-202ENST00000352393 SLC22A2O15244 555 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ZBTB24O43167 697 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 BEST1O76090 585 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 AKAP5P24588 427 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 PNPLA4P41247 253 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 TAF6P49848 677 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 FOLH1Q04609 750 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 PPM1LQ5SGD2 360 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 HFE2Q6ZVN8 426 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 PDZD4Q76G19 769 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 TMEM151AQ8N4L1 468 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 CPSF7Q8N684 471 aaKnown RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 KCTD13Q8WZ19 329 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 NTAN1Q96AB6 310 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SLC9A7Q96T83 725 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SERPINI1Q99574 410 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 C20orf96Q9NUD7 363 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 C15orf38-AP3S2A0A0A6YYH1 394 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SMIM28A0A1B0GU29 152 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 RGSL1A5PLK6 1076 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 CAPN8A6NHC0 703 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 AIM2O14862 343 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SBK3P0C264 359 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 NPR3P17342 541 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ADRA1BP35368 520 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 NDUFV1P49821 464 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SCAPQ12770 1279 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ZNF792Q3KQV3 632 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 LSM12Q3MHD2 195 aaKnown RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 LIPMQ5VYY2 423 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 TMC7Q7Z402 723 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ARPINQ7Z6K5 226 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 NPWQ8N729 165 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 KYQ8NBH2 561 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 DCUN1D1Q96GG9 259 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 GPR22Q99680 433 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ANLNQ9NQW6 1124 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 ANKRD6Q9Y2G4 727 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 COMMD3-BMI1R4GMX3 469 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 FNDC1Q4ZHG4 1894 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-202ENST00000352393 SHROOM3Q8TF72 1996 aa24.98■■□□□ 1.59
CPNE1-202ENST00000352393 TK2O00142 265 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 GPR32O75388 356 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 RPL14P50914 215 aaKnown RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 AIF1P55008 147 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 ZBTB17Q13105 803 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 ANO4Q32M45 955 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 SEL1L3Q68CR1 1132 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 DSELQ8IZU8 1212 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 MARVELD2Q8N4S9 558 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 RP9Q8TA86 221 aaKnown RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 IL22Q9GZX6 179 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 KATNBL1Q9H079 304 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 CDHR5Q9HBB8 845 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 IARS2Q9NSE4 1012 aaKnown RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 ETAA1Q9NY74 926 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 PACSIN3Q9UKS6 424 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 MAGEB16A2A368 324 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 I6L893 689 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 CLDN5O00501 218 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 TXNDC9O14530 226 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 NCAM2O15394 837 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 GRID2O43424 1007 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 DENRO43583 198 aaKnown RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 ATP9BO43861 1147 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 SMIM18P0DKX4 95 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 WARSP23381 471 aaKnown RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 HADHAP40939 763 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 NPY2RP49146 381 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 THOP1P52888 689 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 NSUN2Q08J23 767 aaKnown RBP eCLIP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 PPIL2Q13356 520 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 BNC2Q6ZN30 1099 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-202ENST00000352393 PAQR9Q6ZVX9 377 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 GCNAQ96QF7 691 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 EPB41L1Q9H4G0 881 aa24.97■■□□□ 1.59
CPNE1-202ENST00000352393 WDR6Q9NNW5 1121 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms