RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
PTPN11-201ENST00000351677 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 MMADHCQ9H3L0 296 aaPredicted RBP16.26■□□□□ 0.19
PTPN11-201ENST00000351677 MIEF1Q9NQG6 463 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 MRC1P22897 1456 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 LINC00854A0A1B0GVQ3 168 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CCDC159P0C7I6 412 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CCDC166P0CW27 439 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CCNB1P14635 433 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CYP2A7P20853 494 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 PLEKHM3Q6ZWE6 761 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 BHLHE22Q8NFJ8 381 aaPredicted RBP16.26■□□□□ 0.19
PTPN11-201ENST00000351677 TRPM4Q8TD43 1214 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 BTBD7Q9P203 1132 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 HSMCR30P0CW71 290 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 OMDQ99983 421 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 ZNF670Q9BS34 389 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 PCDHB12Q9Y5F1 795 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 DLGAP3O95886 979 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 GSTM1P09488 218 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 GSSP48637 474 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 IL27RAQ6UWB1 636 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 GPSM1Q86YR5 675 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SYTL1Q8IYJ3 562 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 ERLEC1Q96DZ1 483 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TBC1D10AQ9BXI6 508 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TMEM245Q9H330 911 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 KRT84Q9NSB2 600 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 BCL2L1Q07817 233 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 UBAP2LQ14157 1087 aaKnown RBP16.25■□□□□ 0.19
PTPN11-201ENST00000351677 LPCAT2Q7L5N7 544 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SPATA6LQ8N4H0 392 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 BSNDQ8WZ55 320 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 MECRQ9BV79 373 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 MAN1C1Q9NR34 630 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 FGF10O15520 208 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-201ENST00000351677 LRPAP1P30533 357 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 RAD23AP54725 363 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 WDR41Q9HAD4 459 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 ZC4H2Q9NQZ6 224 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SALL4Q9UJQ4 1053 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 C2CD2Q9Y426 696 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 PGK1P00558 417 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 FGFR1P11362 822 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 RTP1P59025 263 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SPPL2AQ8TCT8 520 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TRPC4APQ8TEL6 797 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TMEM159Q96B96 161 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 EBNA1BP2Q99848 306 aaKnown RBP16.25■□□□□ 0.19
PTPN11-201ENST00000351677 COG5Q9UP83 839 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
PTPN11-201ENST00000351677 RIPK3Q9Y572 518 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 YTHDF3Q7Z739 585 aaKnown RBP16.25■□□□□ 0.19
PTPN11-201ENST00000351677 EFCAB3Q8N7B9 438 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TPD52L3Q96J77 140 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SLC25A23Q9BV35 468 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 SYBUQ9NX95 663 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TRPC4Q9UBN4 977 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
PTPN11-201ENST00000351677 TCRBV9S1A1TA0A576 114 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TCRBV7S2A1N4TA0A589 114 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 FARP2O94887 1054 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 LDLRP01130 860 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 LTA4HP09960 611 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ZNF135P52742 658 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 QPCTQ16769 361 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TNS4Q8IZW8 715 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 RASGEF1CQ8N431 466 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 MBOAT7Q96N66 472 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ACSS3Q9H6R3 686 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 CLOCKO15516 846 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 PCDH8O95206 1070 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ATP5BP06576 529 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TSPAN8P19075 237 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 GRIA4P48058 902 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 MAD2L1Q13257 205 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 FRG1Q14331 258 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 PLEKHA7Q6IQ23 1121 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TMEM26Q6ZUK4 368 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 STK32CQ86UX6 486 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 C12orf56Q8IXR9 622 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 C10orf53Q8N6V4 93 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 C18orf25Q96B23 403 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ANKRD27Q96NW4 1050 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 RNPEPL1Q9HAU8 725 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 RNASEH1O60930 286 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 KLRC2P26717 231 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ARMC12Q5T9G4 340 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ABHD15Q6UXT9 468 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 CCDC103Q8IW40 242 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 UTP15Q8TED0 518 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms