RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FAM169AQ9Y6X4 670 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 TET1Q8NFU7 2136 aa7.07□□□□□ -1.28
TRIM55-203ENST00000350034 PRUNE2Q8WUY3 3088 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CENPFP49454 3210 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ZCWPW2A0A1B0GU75 182 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 FAM237BA0A1B0GVD1 139 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 SLC12A8A0AV02 714 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 MAGEB16A2A368 324 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CARNS1A5YM72 827 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF840PA6NDX5 716 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ARHGAP42A6NI28 874 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TRIM49D1C9J1S8 452 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 F5H423 210 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 DFFAO00273 331 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 KIAA0355O15063 1070 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TLR5O60602 858 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 KRT38O76015 456 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ANXA9O76027 345 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 USP1O94782 785 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 SEC24AO95486 1093 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 MOCS2O96007 188 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 VIMP08670 466 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CLTBP09497 229 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CA4P22748 312 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 OR1D2P34982 312 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 GJA8P48165 433 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 PAPOLAP51003 745 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CRADDP78560 199 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 RAB33AQ14088 237 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 HNRNPDQ14103 355 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 PRPSAP1Q14558 356 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ALFQ53S48 1182 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 C10orf120Q5SQS8 335 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 NADSYN1Q6IA69 706 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 NAPEPLDQ6IQ20 393 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 DENND5AQ6IQ26 1287 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CGB2Q6NT52 195 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 PACS1Q6VY07 963 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 OTOP3Q7RTS5 596 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 LINC00523Q86TU6 105 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CHSY1Q86X52 802 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CTAGE3PQ8IX95 158 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TEX26Q8N6G2 289 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CCDC197Q8NCU1 140 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF461Q8TAF7 563 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 GDAP1Q8TB36 358 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TCP10LQ8TDR4 215 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 GIPC2Q8TF65 315 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 DYDC1Q8WWB3 177 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 IGSF8Q969P0 613 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ISL2Q96A47 359 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 AZIN2Q96A70 460 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TADA1Q96BN2 335 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 GRAMD1AQ96CP6 724 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF558Q96NG5 402 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 FCRL3Q96P31 734 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TGS1Q96RS0 853 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CDK5RAP1Q96SZ6 601 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ELAC2Q9BQ52 826 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 KIFC1Q9BW19 673 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 ZMYND15Q9H091 742 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 VPS11Q9H270 941 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 CCSER2Q9H7U1 834 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 TMEM39AQ9NV64 488 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 FGFR1OP2Q9NVK5 253 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 BFARQ9NZS9 450 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 SLC17A7Q9P2U7 560 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 PRKAG3Q9UGI9 489 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 IPO11Q9UI26 975 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 SOX13Q9UN79 622 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 AAR2Q9Y312 384 aaKnown RBP7.06□□□□□ -1.28
TRIM55-203ENST00000350034 IKBKGQ9Y6K9 419 aa7.06□□□□□ -1.28
TRIM55-203ENST00000350034 SCN5AQ14524 2016 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 FNDC1Q4ZHG4 1894 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 TRIM43BA6NCK2 446 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CCT8L1PA6NM43 557 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 EDF1O60869 148 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 LILRB3O75022 631 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 EFCAB14O75071 495 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 USP12O75317 370 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CNTN5O94779 1100 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 UPP2O95045 317 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 TIMP1P01033 207 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 IL1BP01584 269 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 HLA-DQB2P05538 268 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 POLBP06746 335 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 PYGBP11216 843 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 RPL17P18621 184 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 LAG3P18627 525 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ADRA1DP25100 572 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ITGB8P26012 769 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 GBP2P32456 591 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MAGEA12P43365 314 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MAPKAPK2P49137 400 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 GEMP55040 296 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 YBEYP58557 167 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 DEFB103AP81534 67 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CDH17Q12864 832 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms