RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PCDHGB5Q9Y5G0 923 aa18.45■□□□□ 0.54
PTP4A3-202ENST00000349124 JCHAINP01591 159 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 USP17L7P0C7H9 530 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 DARSP14868 501 aaKnown RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 ETS2P15036 469 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 NAGLUP54802 743 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 PPIL2Q13356 520 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 RASIP1Q5U651 963 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CWF19L1Q69YN2 538 aaKnown RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 BNIPLQ7Z465 357 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CLEC14AQ86T13 490 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 SNX32Q86XE0 403 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 PNPLA1Q8N8W4 532 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 VPS39Q96JC1 886 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 GCNAQ96QF7 691 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 KLHL4Q9C0H6 718 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 TCF7L2Q9NQB0 619 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 ARHGAP26Q9UNA1 814 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CDY2AQ9Y6F7 541 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CDY1Q9Y6F8 540 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 COL1A2P08123 1366 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 SF3B1O75533 1304 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■■ 52.2
PTP4A3-202ENST00000349124 CAPN8A6NHC0 703 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 STX16-NPEPL1H3BU86 382 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CFLARO15519 480 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CYP2B6P20813 491 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 NUDT2P50583 147 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 PKNOX1P55347 436 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 TPI1P60174 286 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 NAB1Q13506 487 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 HNRNPDQ14103 355 aaKnown RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 GRAMD1BQ3KR37 738 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 LSM12Q3MHD2 195 aaKnown RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 ARL13AQ5H913 290 aaPredicted RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 KCTD11Q693B1 232 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 FBXL19Q6PCT2 694 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 GPRC5AQ8NFJ5 357 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 RHOBTB2Q9BYZ6 727 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 TASP1Q9H6P5 420 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 VTA1Q9NP79 307 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 CASS4Q9NQ75 786 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 ADARB2Q9NS39 739 aaKnown RBP18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 ZDHHC2Q9UIJ5 367 aa18.44■□□□□ 0.54
PTP4A3-202ENST00000349124 DYNC1LI2O43237 492 aaPredicted RBP18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 AP1G2O75843 785 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 NCAM1P13591 858 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 GLDCP23378 1020 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 GABRB3P28472 473 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 MTTPP55157 894 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 INHBEP58166 350 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 ADGRG6Q86SQ4 1221 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 KBTBD6Q86V97 674 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 SPATA22Q8NHS9 363 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 USP13Q92995 863 aaPredicted RBP18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 OMDQ99983 421 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 FERMT1Q9BQL6 677 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 BRCA2P51587 3418 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 CYP2C9P11712 490 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 ARSAP15289 507 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 PIK3R1P27986 724 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 GRIA4P48058 902 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 FASTKD5Q7L8L6 764 aaKnown RBP18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 KCTD4Q8WVF5 259 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 TNIP3Q96KP6 325 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 CDRT15Q96T59 188 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 ACE2Q9BYF1 805 aaPredicted RBP18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 DDIT4Q9NX09 232 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 INPP5FQ9Y2H2 1132 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 A0A1B0GVG6 124 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 CD4P01730 458 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 MYL4P12829 197 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 CDK7P50613 346 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 MED21Q13503 144 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 UBXN11Q5T124 520 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 ARHGAP36Q6ZRI8 547 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 KDELC2Q7Z4H8 507 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 ISL2Q96A47 359 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 SLC2A13Q96QE2 648 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 CRTAC1Q9NQ79 661 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 OXSMQ9NWU1 459 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 STAP1Q9ULZ2 295 aa18.43■□□□□ 0.54
PTP4A3-202ENST00000349124 BRCA1P38398 1863 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 MYBPHLA2RUH7 354 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 TMEM233B4DJY2 109 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 PIGNO95427 931 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SMIM10L2AP0DMW4 78 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SMIM10L2BP0DMW5 78 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 UQCRBP14927 111 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 TFEBP19484 476 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 GSTT1P30711 240 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SATB1Q01826 763 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 ROR2Q01974 943 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 DGKDQ16760 1214 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 CNPY1Q3B7I2 92 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 MMEL1Q495T6 779 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 CATSPER2Q96P56 530 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 TRAPPC9Q96Q05 1148 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 ILKAPQ9H0C8 392 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms