RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 HPSEQ9Y251 543 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 TRDMT1O14717 391 aaKnown RBP23.46■■□□□ 1.35
NPAS3-201ENST00000346562 PARP6Q2NL67 630 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 DEFB132Q7Z7B7 95 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 SNX6Q9UNH7 406 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 ADM5C9JUS6 153 aa23.45■■□□□ 1.35
NPAS3-201ENST00000346562 ADCYAP1R1P41586 468 aa23.45■■□□□ 1.35
NPAS3-201ENST00000346562 ZNF57Q68EA5 555 aaPredicted RBP23.45■■□□□ 1.35
NPAS3-201ENST00000346562 KLHL24Q6TFL4 600 aa23.45■■□□□ 1.35
NPAS3-201ENST00000346562 TRAPPC12Q8WVT3 735 aa23.45■■□□□ 1.35
NPAS3-201ENST00000346562 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.35
NPAS3-201ENST00000346562 MARSP56192 900 aaKnown RBP23.45■■□□□ 1.34
NPAS3-201ENST00000346562 CXorf40BQ96DE9 158 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 INVSQ9Y283 1065 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 STON1Q9Y6Q2 735 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 FAM205AQ6ZU69 1335 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 TRIM43BA6NCK2 446 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 SLITRK3O94933 977 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 ANXA5P08758 320 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 CORO7P57737 925 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 TMPRSS6Q8IU80 811 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 ZSWIM2Q8NEG5 633 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 OXNAD1Q96HP4 312 aaPredicted RBP23.45■■□□□ 1.34
NPAS3-201ENST00000346562 HIC2Q96JB3 615 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 SENP6Q9GZR1 1112 aaPredicted RBP23.45■■□□□ 1.34
NPAS3-201ENST00000346562 ZNF232Q9UNY5 417 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 PMF1Q6P1K2 205 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 METTL3Q86U44 580 aaKnown RBP23.45■■□□□ 1.34
NPAS3-201ENST00000346562 ITFG1Q8TB96 612 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 N6AMT1Q9Y5N5 214 aa23.45■■□□□ 1.34
NPAS3-201ENST00000346562 SLC44A4Q53GD3 710 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 UXS1Q8NBZ7 420 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 SPATA20Q8TB22 786 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 MTFMTQ96DP5 389 aaKnown RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 GLIS2Q9BZE0 524 aaPredicted RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 RNPEPQ9H4A4 650 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 PTPRHQ9HD43 1115 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 PEX6Q13608 980 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 TMEM119Q4V9L6 283 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 HECTD3Q5T447 861 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 OTOP1Q7RTM1 612 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 UNC93AQ86WB7 457 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 PALB2Q86YC2 1186 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 SENP8Q96LD8 212 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 ULBP1Q9BZM6 244 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 TMEM134Q9H6X4 195 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 WWP2O00308 870 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 NAA20P61599 178 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 FAM220AQ7Z4H9 259 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 CDCA5Q96FF9 252 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 RACGAP1Q9H0H5 632 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 RSPH9Q9H1X1 276 aaPredicted RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 A8MX80 341 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 ECDO95905 644 aaPredicted RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 PAX3P23760 479 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 HK2P52789 917 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 KIAA1324Q6UXG2 1013 aaKnown RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 IFNLR1Q8IU57 520 aaPredicted RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 MAP4K3Q8IVH8 894 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 RNF145Q96MT1 663 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 SLC25A23Q9BV35 468 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 URADA6NGE7 173 aa23.44■■□□□ 1.34
NPAS3-201ENST00000346562 INTS11Q5TA45 600 aaKnown RBP23.44■■□□□ 1.34
NPAS3-201ENST00000346562 NRCAMQ92823 1304 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 FRG1Q14331 258 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 NKAPQ8N5F7 415 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 OR52L1Q8NGH7 329 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 GRIN3AQ8TCU5 1115 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PPIEQ9UNP9 301 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 GPSM3Q9Y4H4 160 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 CEMIPQ8WUJ3 1361 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 STX11O75558 287 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 GSTM5P46439 218 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PSEN1P49768 467 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PCID2Q5JVF3 399 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 RTL3Q8N8U3 475 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 C18orf25Q96B23 403 aaPredicted RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 QSOX1O00391 747 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 OR6B1O95007 311 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 MED26O95402 600 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PTPN1P18031 435 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 RRP1BQ14684 758 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 KCNT2Q6UVM3 1135 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 ASZ1Q8WWH4 475 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 BSNDQ8WZ55 320 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 C9orf16Q9BUW7 83 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 ARHGAP20Q9P2F6 1191 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 ZMYND8Q9ULU4 1186 aaPredicted RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 APOC4-APOC2K7ER74 178 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 APOC2P02655 101 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 ZFP1Q6P2D0 407 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 SEMA4DQ92854 862 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 NOS2P35228 1153 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PTSQ03393 145 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 RAET1GQ6H3X3 334 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 NEK5Q6P3R8 708 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 PEG10Q86TG7 708 aaKnown RBP23.43■■□□□ 1.34
NPAS3-201ENST00000346562 TCP10LQ8TDR4 215 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms