RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 GAL3ST3Q96A11 431 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 MED8Q96G25 268 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 TUBGCP5Q96RT8 1024 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 STRBPQ96SI9 672 aaKnown RBP8.47□□□□□ -1.05
MCPH1-201ENST00000344683 VPS45Q9NRW7 570 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 TUBE1Q9UJT0 475 aa8.47□□□□□ -1.05
MCPH1-201ENST00000344683 A0A088AWK7 358 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 CASKO14936 926 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 MPZL2O60487 215 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PRMT3O60678 531 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 NADKO95544 446 aaPredicted RBP8.46□□□□□ -1.05
MCPH1-201ENST00000344683 HOXB8P17481 243 aaPredicted RBP8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ZNF10P21506 573 aaPredicted RBP8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ETFBP38117 255 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PARP6Q2NL67 630 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PIK3R6Q5UE93 754 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 TMPRSS11AQ6ZMR5 421 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 TMEM17Q86X19 198 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 QRFPRQ96P65 431 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 TEFMQ96QE5 360 aaKnown RBP8.46□□□□□ -1.05
MCPH1-201ENST00000344683 VPS35Q96QK1 796 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 TCF12Q99081 682 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ACOX2Q99424 681 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 VPS51Q9UID3 782 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 NAGPAQ9UK23 515 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PLAGL2Q9UPG8 496 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 TNPO3Q9Y5L0 923 aaKnown RBP8.46□□□□□ -1.05
MCPH1-201ENST00000344683 IQCMA0A1B0GVH7 501 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PRH1P02810 166 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 NR2F6P10588 404 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 DNAJB2P25686 324 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 RFX3P48380 749 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 MYL6P60660 151 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ACTR3P61158 418 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 MED22Q15528 200 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 EEPD1Q7L9B9 569 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 CD302Q8IX05 232 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PEX5LQ8IYB4 626 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 PGM2Q96G03 612 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 MID1IP1Q9NPA3 183 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ANGPT4Q9Y264 503 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 ALG5Q9Y673 324 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 LMTK3Q96Q04 1460 aa8.46□□□□□ -1.05
MCPH1-201ENST00000344683 FAM172BPA6NC97 362 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 IFRD1O00458 451 aaPredicted RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CYP1A1P04798 512 aaPredicted RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 S100A3P33764 101 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 MNDAP41218 407 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PHC1P78364 1004 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 DEFA5Q01523 94 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 GRB14Q14449 540 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CYB5R4Q7L1T6 521 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ARCQ7LC44 396 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 LHFPL3Q86UP9 236 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 SNX32Q86XE0 403 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 BBS4Q96RK4 519 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ANKZF1Q9H8Y5 726 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ENTPD4Q9Y227 616 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CPDO75976 1380 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 WRBO00258 174 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PRKAB2O43741 272 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 TRIM3O75382 744 aaPredicted RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 SEC22BO75396 215 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 TADA2AO75478 443 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 UMPSP11172 480 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 F8A1P23610 371 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CD151P48509 253 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 MTAPQ13126 283 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ARHGAP15Q53QZ3 475 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 DNAJA4Q8WW22 397 aaPredicted RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 NIF3L1Q9GZT8 377 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PRDM16Q9HAZ2 1276 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 AGAP1Q9UPQ3 857 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 PEX16Q9Y5Y5 336 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CPSF1Q10570 1443 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 H3BQF6 201 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CST1P01037 141 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ERP29P30040 261 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 HALP42357 657 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 RBM34P42696 430 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 RGS7P49802 495 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CEBPGP53567 150 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CYP4F2P78329 520 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 E2F2Q14209 437 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ZNF621Q6ZSS3 439 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 DNAJC10Q8IXB1 793 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 C17orf75Q9HAS0 396 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 GDF3Q9NR23 364 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 RBMX2Q9Y388 322 aaKnown RBP8.46□□□□□ -1.06
MCPH1-201ENST00000344683 TRIM38O00635 465 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 ULK1O75385 1050 aa8.46□□□□□ -1.06
MCPH1-201ENST00000344683 FAM228BP0C875 321 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms