RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 POLR3BQ9NW08 1133 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 GPATCH2LQ9NWQ4 482 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 EBF1Q9UH73 591 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 FZD10Q9ULW2 581 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 CCL26Q9Y258 94 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 PCDHB5Q9Y5E4 795 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 ASPMQ8IZT6 3477 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 NYNRINQ9P2P1 1898 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 M0QYT0 321 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 GIPC1O14908 333 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 OPA1O60313 960 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 RHOBTB1O94844 696 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 F9P00740 461 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 DRD1P21728 446 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 DDX6P26196 483 aaKnown RBP eCLIP13.87□□□□□ -0.193e-7■■□□□ 14.5
HERPUD1-202ENST00000344114 IVDP26440 423 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 L1CAMP32004 1257 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 ARL4AP40617 200 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 MMRN1Q13201 1228 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 SLMAPQ14BN4 828 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 CA9Q16790 459 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 FBXO43Q4G163 708 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 LRIG3Q6UXM1 1119 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 CEP128Q6ZU80 1094 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 SYT13Q7L8C5 426 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 CCDC185Q8N715 623 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 RIN3Q8TB24 985 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 P3H4Q92791 437 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 USP13Q92995 863 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 C8orf48Q96LL4 319 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 TXLNGYQ9BZA5 131 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 FOXP3Q9BZS1 431 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 HELZP42694 1942 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-202ENST00000344114 TNRC6BQ9UPQ9 1833 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 LNP1A1A4G5 178 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 TMEM8BA6NDV4 472 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 C4orf47A7E2U8 309 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SOBPA7XYQ1 873 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 F11P03951 625 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 FYNP06241 537 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 NCAM1P13591 858 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 IL4RP24394 825 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 CYP2F1P24903 491 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 HSD17B3P37058 310 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 AVPR1AP37288 418 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 GRIK1P39086 918 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 ADCY8P40145 1251 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 GALK1P51570 392 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SLC5A3P53794 718 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 CREB5Q02930 508 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 DHX9Q08211 1270 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SCAPQ12770 1279 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 MGAT5BQ3V5L5 792 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 PPP6R3Q5H9R7 873 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 EFHC2Q5JST6 749 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SYPL2Q5VXT5 272 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 RHBDF2Q6PJF5 856 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 FAM131BQ86XD5 332 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 GOLGA6L1Q8N7Z2 621 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SPPL2BQ8TCT7 592 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 C2orf15Q8WU43 125 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 ZIM3Q96PE6 472 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 KCTD15Q96SI1 283 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 TDP1Q9NUW8 608 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 NAALADL1Q9UQQ1 740 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 SPEGQ15772 3267 aa13.86□□□□□ -0.19
HERPUD1-202ENST00000344114 H3BQF6 201 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 H3BRJ5 948 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 SGK1O00141 431 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 DNALI1O14645 258 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 DCLK1O15075 740 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 APBB3O95704 486 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 RBP3P10745 1247 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ARSAP15289 507 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PECAM1P16284 738 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 HMGA1P17096 107 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 CSRP1P21291 193 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 GJA4P35212 333 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ITGA8P53708 1063 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PITX1P78337 314 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 FOXC1Q12948 553 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 TRIP13Q15645 432 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 IZUMO3Q5VZ72 239 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 NAIF1Q69YI7 327 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 IQCKQ8N0W5 287 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PQLC3Q8N755 202 aa13.85□□□□□ -0.19
HERPUD1-202ENST00000344114 PLD5Q8N7P1 536 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms