RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 JRKO75564 520 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 VAPBO95292 243 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 KRT8P05787 483 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 UGT2B4P06133 528 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LDHCP07864 332 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ABCB1P08183 1280 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SNHG28P0DPA3 235 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF182P17025 639 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ITIH1P19827 911 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CD247P20963 164 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PRKACBP22694 351 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 GLDCP23378 1020 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 RPL22P35268 128 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 BTDP43251 543 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LEPRP48357 1165 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PRAMEP78395 509 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MPP1Q00013 466 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CD300CQ08708 224 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TRIM25Q14258 630 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PIGHQ14442 188 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 COG2Q14746 738 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LAPTM4AQ15012 233 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 BOLA3Q53S33 107 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 C1orf186Q6ZWK4 172 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 USP50Q70EL3 339 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PHF13Q86YI8 300 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ARMC8Q8IUR7 673 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 GRAMD2AQ8IUY3 354 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZC3H7AQ8IWR0 971 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SIMC1Q8NDZ2 872 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FBXL13Q8NEE6 735 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 BEST2Q8NFU1 509 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TANKQ92844 425 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 DYNLL2Q96FJ2 89 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FEM1CQ96JP0 617 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FAR2Q96K12 515 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 KLHL32Q96NJ5 620 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LENG8Q96PV6 779 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 DHRS9Q9BPW9 319 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 EIF2AK1Q9BQI3 630 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SLC39A3Q9BRY0 314 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 C20orf27Q9GZN8 174 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CPVLQ9H3G5 476 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ANKHQ9HCJ1 492 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 AKIP1Q9NQ31 210 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 XPNPEP1Q9NQW7 623 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 STMN3Q9NZ72 180 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 NPAP1Q9NZP6 1156 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TBC1D14Q9P2M4 693 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 POU2F3Q9UKI9 436 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SNX13Q9Y5W8 968 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FADS2P1A8MWK0 482 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CYB561D2O14569 222 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SEC14L2O76054 403 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FCGR1AP12314 374 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MYCLP1P12525 358 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 NCAM1P13591 858 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ENO3P13929 434 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 IFNA8P32881 189 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 IDUAP35475 653 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CDKN2BP42772 138 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SCNN1DP51172 638 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 IST1P53990 364 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PHC1P78364 1004 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PRKCQQ04759 706 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 C19orf57Q0VDD7 668 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MERTKQ12866 999 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ILF2Q12905 390 aaKnown RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MAMLD1Q13495 774 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CEACAM7Q14002 265 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 C15orf59Q2T9L4 293 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MTX3Q5HYI7 312 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 BROXQ5VW32 411 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CES4AQ5XG92 561 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 UGT3A1Q6NUS8 523 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TUBA3EQ6PEY2 450 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FBXO46Q6PJ61 603 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF773Q6PK81 442 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 CCDC81Q6ZN84 652 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZCCHC23Q6ZST2 131 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 BBS12Q6ZW61 710 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 MAVSQ7Z434 540 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 TFAP2DQ7Z6R9 452 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 THNSL1Q8IYQ7 743 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 PIK3C3Q8NEB9 887 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ABHD11Q8NFV4 315 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 KAT5Q92993 513 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SNX18Q96RF0 628 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 STRA6Q9BX79 667 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 RNF38Q9H0F5 515 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms