RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CASS4Q9NQ75 786 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 ITGAXP20702 1163 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 TTKP33981 857 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 GJA8P48165 433 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 ZNF143P52747 638 aaPredicted RBP12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 FAM183BPQ6ZVS7 135 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 LENG9Q96B70 501 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 TBCDQ9BTW9 1192 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 CEP44Q9C0F1 390 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 STN1Q9H668 368 aaKnown RBP12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 MATN2O00339 956 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 PABPC4LP0CB38 370 aaKnown RBP12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 CRABP2P29373 138 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 DPP9Q86TI2 863 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 APPL2Q8NEU8 664 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 TRIM39Q9HCM9 518 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 LIMD1Q9UGP4 676 aa12.73□□□□□ -0.37
SSX2IP-201ENST00000342203 TK2O00142 265 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SLC9B1Q4ZJI4 515 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 PAGE2BQ5JRK9 111 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 LRRC8DQ7L1W4 858 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 BLOC1S5Q8TDH9 187 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 IGLV3-22A0A075B6J6 115 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 H6PDO95479 791 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 CHRNGP07510 517 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 FCGR1AP12314 374 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 GOT1P17174 413 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 CAP2P40123 477 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 YAP1P46937 504 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 CD151P48509 253 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SIX1Q15475 284 aaPredicted RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SPPL2CQ8IUH8 684 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SLC35B2Q8TB61 432 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 PTCD3Q96EY7 689 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 OR52B2Q96RD2 323 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 PKP2Q99959 881 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 NDUFS3O75489 264 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SEPHS1P49903 392 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 TBCBQ99426 244 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 COQ7Q99807 217 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 OLA1Q9NTK5 396 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 MRC1P22897 1456 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 TRAFD1O14545 582 aaPredicted RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 TSC22D2O75157 780 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SORBS2O94875 1100 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 ZNF682O95780 498 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 FRG1Q14331 258 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SPANXN3Q5MJ09 141 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 ZDHHC13Q8IUH4 622 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 UBR7Q8N806 425 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 GPR88Q9GZN0 384 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 PARVBQ9HBI1 364 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 KANSL1LA0AUZ9 987 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 DNAJA2O60884 412 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 ASS1P00966 412 aaKnown RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 IMPDH2P12268 514 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 DEFB106AQ8N104 65 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 MPP5Q8N3R9 675 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 GATA6Q92908 595 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 ANAPC2Q9UJX6 822 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
SSX2IP-201ENST00000342203 FAM95CA0A1B0GW59 222 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 PDLIM1O00151 329 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 ERBB2P04626 1255 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 CYP1A1P04798 512 aaPredicted RBP12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 GSNP06396 782 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 SLC18A1P54219 525 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 POU4F1Q01851 419 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 GRM1Q13255 1194 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 IL23RQ5VWK5 629 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 CALML6Q8TD86 181 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 SNX19Q92543 992 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 PCDH12Q9NPG4 1184 aa12.71□□□□□ -0.37
SSX2IP-201ENST00000342203 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms